Table 2.
Biological pathways affected in the DGKη-KO mouse cerebral cortex.
Database category | Biological pathway | P-value | Gene Count | Genes |
---|---|---|---|---|
GOTERM_BP | Positive regulation of transcription by RNA polymerase II (GO:0045944) | 0.004 | 8 | Bsx, Foxp3d, Glp1re,Hif3a, Il1bf, Neurog1, Serpinf2, |
KEGG_PATHWAY | Neuroactive ligand-receptor Interaction (mmu04080) | 0.031 | 4 | Fpr2, Glp1re, Ghg,Prlh |
GOTERM_BP | Positive regulation of cytosolic calcium ion concentrationa (GO:0007204) | 0.039 | 3 | Fpr2, Glp1re, Il1bf, |
KEGG_PATHWAY | Jak-STAT signaling pathwayb (mmu04630) | 0.049 | 3 | Ghg, Prlh, Thpo |
GOTERM_BP | Positive regulation of ERK1 and ERK2 cascadec (GO:0070374) | 0.059 | 3 | Il1bf, Serpinf2, Thpo |
For each term, an EASE score cut-off of P-value <0.1 was applied along with gene count ≥3. Along with database category for GO and KEGG using DAVID, Benjamini false discovery rate-corrected P-value, gene count and gene lists are presented. Genes and biological pathways implicated in BPD are indicated in bold font.
[31].
[27].
[26].