Table 1.
Primer* | Oligonucleotide sequence (5’-3’)** | Gene | size of amplified product (bp) | Control strain | References |
---|---|---|---|---|---|
MEC-1 | AAAATCGATGGTAAAGGTTGGC | S. aureus | |||
MEC-2 | AGTTCTGGCACTACCGGATTTGC | mecA | 533 | ATCC43300 | (17) |
BLAZ-1 | ACTTCAACACCTGCTGCTTTC | blaZ | 240 | S. aureus | (7) |
BLAZ-2 | TAGGTTCAGATTGGCCCTTAG | ATCCBAA-2312 | |||
TETM-1 | GAACTCGAACAAGAGGAAAGC | S. pyogenes | |||
TETM-2 | ATGGAAGCCCAGAAAGG T | tetM | 406 | 7020 | |
TETK-1 | TCGATAGGAACAGCAGTA | E. faecium | |||
TETK-2 | CAGCAGATCCTACTCCTT | tetK | 155 | ET18 | (13) |
TETL-1 | TGGTGGAATGATAGCCCATT | ||||
TETL-1 | CAGGAATGACAGCACGCTAA | tetL | 229 | ||
TETO-1 | AACTTAGGCATTCTGGCTCAC | E. faecalis | |||
TETO-2 | TCCCACTGTTCCATATCGTCA | tetO | 515 | JH2-2TET | |
ERMA-1 | CCCGAAAAATACGCAAAATTTCAT | S. haemolyticus | |||
ERMA-2 | CCCTGTTTACCCATTTATAAACG | ermA | 590 | 955 | |
ERMB-1 | TGGTATTCCAAATGCGTAATG | E. faecium | (13, 14) | ||
ERMB-2 | CTGTGGTATGGCGGGTAAGT | ermB | 745 | PE1 | |
MSRA/B-1 | GCAAATGGTGTAGGTAAGACAACT | S. aureus | |||
MSRA/B-2 | ATCATGTGATGTAAACAAAAT | msrA/B | 399 | RN4220 | (26) |
ACC-1 | CAGGAATTTATCGAAAATGGTAGAAAAG | acc(6’)-le- | E. faecium | ||
ACC-2 | CACAATCGACTAAAGAGTACCAATC | aph(2”)-la | 348 | M48 | (27, 28) |
CFR-1 | TGAAGTATAAAGCAGGTTGGGAGTCA | ||||
CFR-2 | ACCATATAATTGACCACAAGCAGC | cfr | 746 | (11) | |
ESA1 | ACGATCAATTTTTACAGC | S. aureus | |||
ESA2 | TGCATGTTTTCAGAGTTAATC | sea | 144 | FRI913 | (1) |
ESB1 | GAATGATATTAATTCGCATC | ATCC13566 | |||
ESB2 | TCTTTGTCGTAAGATAAACTTC | seb | 416 | (5) | |
ESC1 | GACATAAAAGCTAGGAATTT | S. aureus | |||
ESC2 | AAATCGGATTAACATTATCCA | sec | 257 | FRI913 | (1) |
ESD1 | TTACTAGTTTGGTAATATCTCCTT | S. aureus | |||
ESD2 | CCACCATAACAATTAATGC | sed | 334 | FRI151m | (3) |
ESE1 | ATAGATAAAGTTAAAACAAGCAA | S. aureus | |||
ESE2 | TAACTTACCGTGGACCC | see | 170 | FRI913 | (3) |
* The sets of primers were synthesised by Genomed S.A., Poland.
** The concentration of primers was 0.04 μmol