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. 2019 Aug;72:44–58. doi: 10.1016/j.meegid.2018.03.011

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© 2018 The Authors

This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

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Fig. 5 — CPLP-TB database, an online tool purposely designed to house data on M. tuberculosis clinical isolates' originary from the CPLP, therefore enabling the tracking of specific strains across the Lusophone space. The database features a web interface composed of a main panel with six different page tabs and a left-sided panel that enables users to apply filters to data displayed on the main panel. Data displayed on the main panel include a data-table with strain information such as drug resistance, MIRU-VNTR alleles; different data plots showing enable analysis of the selected data: a choropleth map, which enables users to visualize the distribution of clinical isolates; MIRU-VNTR and Spoligotyping dendrograms; and, a genome-wide phylogenetic tree containing the isolates already subjected to WGS and annotated with the SNP barcode nomenclature.