Table 2.
– Isolates characterized by spoligotyping, number of obtained SITs and number of isolates classified in the main spoligotyping lineages per dataset.
| Country | No. of isolates | No. of SITs | No. of orphan profiles | Spoligotyping main lineages - no. of isolates (%) |
|||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Beijing | CAS | EAI | H | LAM | S | T | X | ||||
| Angola | 89 | 25 | 8 | 0 (0) | 0 (0) | 0 (0) | 1 (1.1) | 55 (61.8) | 0 (0) | 31 (34.8) | 0 (0) |
| Brazil | 760 | 90 | 81 | 0 (0) | 0 (0) | 1 (0.1) | 152 (20) | 326 (42.9) | 8 (1.1) | 185 (24.3) | 13 (1.7) |
| Guinea-Bissau | 13 | 5 | 0 | 8 (61.5) | 0 (0) | 0 (0) | 0 (0) | 2 (15.4) | 0 (0) | 0 (0) | 0 (0) |
| Mozambique | 14 | 6 | 4 | 0 (0) | 0 (0) | 2 (14.3) | 3 (21.4) | 2 (14.3) | 2 (14.3) | 2 (14.3) | 0 (0) |
| Portugal | 363 | 77 | 13 | 26 (7.2) | 4 (1.1) | 4 (1.1) | 18 (5) | 226 (62.3) | 3 (0.8) | 42 (11.6) | 17 (4.7) |