Table 4. Percent nucleotide identity with mouse Igf2-H19 locus enhancers¶.
Species | CS1 (218 bp) |
CS2 (472 bp) |
CS3* (214 bp) |
CS4* (385 bp) |
CS5 (385 bp) |
CS6 (360 bp) |
CS7 (231 bp) |
CS8 (277 bp) |
CS9 (486 bp) |
CS10 (286 bp) |
---|---|---|---|---|---|---|---|---|---|---|
human |
95 (76) |
89 (251) |
No match |
84 (81) |
86 (92) |
87 (95) |
95 (74) |
85 (277) |
84 (112) |
93 (106) |
gorilla |
95 (75) |
89 (251) |
No match |
84 (81) |
86 (92) |
87 (95) |
91 (109) |
87 (246) |
85 (138) |
91 (116) |
olive baboon |
95 (93) |
88 (250) |
No match |
84 (81) |
90 (41) |
87 (95) |
93 (108) |
88 (246) |
83 (138) |
93 (116) |
cow | No match |
91 (103) |
No match |
84 (57) |
89 (53) |
89 (100) |
89 (83) |
95 (122) |
88 (81) |
88 (57) |
pig | No match | No match | No match | No match | No match | No match | No match | No match | No match | No match |
horse | No match |
85 (233) |
93 (41) |
87 (122) |
88 (90) |
85 (160) |
92 (87) |
90 (248) |
94 (108) |
85 (191) |
cat |
93 (61) |
83 (182) |
No match |
89 (104) |
87 (92) |
93 (45) |
No match |
87 (242) |
No match |
89 (126) |
dog | No match |
90 (88) |
No match |
90 (63) |
92 (60) |
89 (92) |
No match |
86 (275) |
No match |
90 (144) |
rat | 97 | 95 | 92 | 96 | 95 | 91 | No match |
99 (273) |
94 | No match |
guinea pig |
95 (122) |
90 (251) |
87 (159) |
86 (106) |
No match |
90 (94) |
93 (105) |
87 (272) |
84 (225) |
94 (111) |
rabbit | No match | No match | No match | No match | No match | No match | No match | No match | No match | No match |
elephant |
91 (95) |
93 (51) |
No match | No match | No match | No match | No match |
87 (174) |
No match |
91 (89) |
armadillo | No match | No match | No match | No match | No match | No match | No match |
83 (93) |
No match | No match |
megabat |
91 (117) |
91 (124) |
No match |
84 (56) |
86 (92) |
93 (41) |
89 (61) |
86 (87) |
87 (39) |
89 (101) |
wallaby | No match | No match | No match | No match | No match | No match | No match |
83 (65) |
No match |
93 (55) |
Tasmanian devil | No match | No match | No match | No match | No match | No match | No match | No match | No match | No match |
opossum | No match | No match | No match | No match | No match | No match | No match | No match | No match | No match |
platypus | No match | No match | No match | No match | No match | No match | No match | No match | No match | No match |
¶Number of base pairs aligned is in parenthesis if less than length in mouse genome.
*Overlap with endodermal enhancers defined by Yoo-Warren et al (50).
No match—no DNA sequence identity detected