. Author manuscript; available in PMC: 2019 Jul 1.

Published in final edited form as: Hum Immunol. 2019 Mar 4;80(7):449–460. doi: 10.1016/j.humimm.2019.03.001

Table 3b.

Concordance rates of 24U B-LCL HLA genes characterized by NGS compared to consensus NGS genotypes

Group	Allelic resolution	HLA gene
Group	Allelic resolution	A	B	C	DRB1	DRB3	DRB4	DRB5	DQA1	DQB1	DPA1	DPB1

01	2-Field	100.0	100.0	100.0	100.0	100.0	96.4	100.0	99.3	100.0	100.0	100.0
	4-Field	93.3	100.0	97.2	99.3	89.8	96.4	100.0	91.7	98.6	87.5	100.0

02	2-Field	100.0	100.0	100.0	97.9	NT	NT	NT	NT	99.5	NT	99.5
	4-Field	99.5	100.0	100.0	97.3	NT	NT	NT	NT	99.4	NT	99.5

03	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0
	4-Field	95.8	95.8	100.0	100.0	84.2	100.0	100.0	95.8	100.0	97.9	100.0

04	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0
	4-Field	97.9	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	93.8	100.0

05	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	97.9	100.0
	4-Field	100.0	100.0	100.0	100.0	95.0	100.0	100.0	97.9	100.0	97.9	100.0

06	2-Field	100.0	100.0	100.0	100.0	NT	NT	NT	100.0	100.0	NT	100.0
	4-Field	100.0	100.0	100.0	100.0	NT	NT	NT	96.4	100.0	NT	100.0

07	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	95.8	100.0
	4-Field	100.0	100.0	100.0	100.0	85.0	100.0	100.0	97.9	100.0	93.8	95.8

08	2-Field	100.0	100.0	100.0	95.8	90.0	95.0	100.0	100.0	97.7	93.8	80.0
	4-Field	100.0	100.0	100.0	89.6	84.2	95.0	100.0	97.9	95.5	93.8	80.0

09	2-Field	100.0	100.0	100.0	NT	NT	NT	NT	NT	NT	NT	NT
	4-Field	100.0	97.9	100.0	NT	NT	NT	NT	NT	NT	NT	NT

10	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0
	4-Field	100.0	100.0	100.0	100.0	90.0	100.0	100.0	100.0	100.0	100.0	95.8

11	2-Field	100.0	100.0	100.0	96.6	NT	NT	NT	99.3	99.3	97.1	98.4
	4-Field	100.0	100.0	100.0	96.6	NT	NT	NT	99.3	98.5	94.3	98.4

12	2-Field	99.3	98.5	98.6	100.0	96.2	88.9	100.0	100.0	98.6	100.0	99.2
	4-Field	99.3	98.6	98.6	99.2	96.2	86.4	100.0	99.2	98.6	98.5	99.2

13	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0
	4-Field	100.0	100.0	100.0	100.0	90.0	100.0	100.0	100.0	100.0	100.0	100.0

14	2-Field	100.0	100.0	100.0	99.3	98.3	98.1	100.0	99.3	98.6	100.0	100.0
	4-Field	97.2	96.5	95.8	99.3	93.1	98.1	100.0	92.4	95.1	89.6	95.8

15	2-Field	91.7	91.7	91.7	91.7	NT	NT	NT	NT	85.4	NT	NT
	4-Field	91.7	91.7	91.7	89.6	NT	NT	NT	NT	83.3	NT	NT

16	2-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0	100.0
	4-Field	100.0	100.0	100.0	100.0	100.0	100.0	100.0	99.5	100.0	100.0	100.0

Abbreviations: NT, HLA gene not typed by the participating group