Table 4b.
Concordance rates between B-LCL HLA genes in the extended panel characterized by NGS compared to consensus NGS genotypes
Group | Allelic resolution | HLA gene |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
A | B | C | DRB1 | DRB3 | DRB4 | DRB5 | DQA1 | DQB1 | DPA1 | DPB1 | ||
01 | 2-Field | 100.0 | 99.6 | 98.9 | 99.6 | 100.0 | 97.6 | 96.6 | 99.2 | 97.0 | 99.6 | 99.2 |
4-Field | 99.7 | 92.9 | 97.4 | 99.6 | 93.6 | 97.6 | 87.1 | 95.4 | 95.9 | 95.8 | 99.2 | |
02 | 2-Field | 100.0 | 100.0 | 100.0 | 99.6 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 |
4-Field | 100.0 | 95.3 | 100.0 | 99.6 | 96.7 | 100.0 | 100.0 | 96.9 | 99.8 | 99.4 | 86.1 | |
16 | 2-Field | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 |
4-Field | 99.8 | 100.0 | 100.0 | 100.0 | 99.6 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | |
17 | 2-Field | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 100.0 | 99.8 | 100.0 | 100.0 |
4-Field | 100.0 | 99.8 | 100.0 | 100.0 | 96.3 | 100.0 | 100.0 | 97.2 | 99.2 | 99.5 | 99.7 | |
18 | 2-Field | 99.8 | 100.0 | 100.0 | 99.8 | 99.5 | 100.0 | 95.8 | 99.6 | 99.2 | 100.0 | 99.8 |
4-Field | 98.6 | 94.8 | 100.0 | 99.4 | 95.7 | 100.0 | 95.7 | 96.6 | 98.6 | 99.6 | 87.1 |