| MAP | M. avium subsp. paratuberculosis |
| miRNAs | MicroRNAs |
| MDMs | Monocyte-derived macrophages |
| M. avium | Mycobacterium avium |
| GO | Gene Ontology |
| KEGG | Kyoto Encyclopedia of Genes and Genomes |
| PDCD4 | programmed cell death protein-4 |
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