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. 2019 Jun 7;11(7):1751–1764. doi: 10.1093/gbe/evz118

Table 1.

Summary of Genetic Diversity Statistics for Nine Populations of Trachidermus fasciatus

Pop ID Variant Sites % Polymorphic Loci Num Indv H O H E Pi F IS NeLD (95% CI)
Dandong 13,681 70.2361 20.3856 0.1231 0.1175 0.1205 –0.0109 Infinite (∞)
Dalian 13,681 72.0050 23.4955 0.1304 0.127 0.1298 –0.0019 2591.1 (2062.7–3481.8)
Qinhuangdao 13,681 67.9629 20.1335 0.1543 0.1382 0.1418 –0.0439 32.0 (31.8–32.2)
Dongying 13,681 74.4609 21.5243 0.1350 0.1298 0.1329 –0.0084 512.8 (485.1–543.8)
Weifang 13,681 72.2973 20.8344 0.1374 0.1292 0.1324 –0.0186 313.9 (301.7–327.1)
Rongcheng 13,681 56.7356 20.8467 0.1192 0.1120 0.1148 –0.0152 23.8 (23.7–23.9)
Wendeng 13,681 58.4753 21.4057 0.1310 0.1167 0.1196 –0.0414 6.8 (6.8–6.9)
Qingdao 13,681 46.6852 20.5603 0.1135 0.1039 0.1066 –0.0236 100.3 (98.3–102.4)
Fuyang 13,681 57.0865 20.5565 0.1364 0.1313 0.1346 –0.0091 1766.0 (1391.6–2414.6)

Note.—Variant Sites, number of total SNPs; % Polymorphic Loci, proportion of SNPs in this populations; Num Indv, number of genotyped individuals averaged over all SNPs; HO, observed heterozygosity; HE, expected heterozygosity; Pi, nucleotide diversity; FIS, inbreeding coefficient of individuals relative to the subpopulation; NeLD, effective populations size estimated based on LD method.