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. 2019 May 2;47(W1):W623–W631. doi: 10.1093/nar/gkz326

Table 1.

List of organisms supported by SeqTailor webserver, including the assembly version of each reference genome, the supported genome regions, and the number of genes, transcripts, splice sites and protein sequences for all transcripts and canonical transcripts respectively

All Transcripts Canonical Transcripts
Organism Genome assembly Genome regions # Genes # Transcripts # Splice sites # Proteins # Genes /transcripts /proteins # Splice sites
Human GRCh37 Chr1–22, X, Y, MT 35 091 138 613 2 018 124 95 304 20 676 413 814
Human GRCh38 Chr1–22, X, Y, MT, 329 alternate loci 36 100 155 341 2 259 292 107 498 20 528 421 390
Chimpanzee Pan-tro-3.0 Chr1–22, X, Y, MT 17 381 41 504 947 134 41 468 17 348 373 978
Mouse GRCm38 Chr1–19, X, Y, MT 36 148 94 462 1 350 332 65 679 22 504 420 830
Rat Rnor_6.0 Chr1–20, X, Y, MT 23 671 31 110 588 376 28 897 21 935 404 576
Cow ARS-UCD1.2 Chr1–29, X, MT 16 515 31 214 785 250 31 188 16 489 353 780
Chicken GRCg6a Chr1–33, W, Z, MT 12 303 22 158 573 360 22 158 12 303 278 736
Lizard AnoCar2.0 Chr1–6, MT 6105 6321 155 556 6321 6105 149 500
Zebrafish GRCz11 Chr1–25, MT 25 864 49 308 908 190 45 633 24 568 483 174
Fruitfly BDGP6 Chr2–4, X, Y, MT 14 226 30 804 363 118 30 478 13 926 119 752
Arabidopsis TAIR10 Chr1–5, MT 12 702 23 376 336 118 23 376 12 702 159 070
Rice IRGSP-1.0 Chr1–12, MT 2779 12 455 134 960 12 452 2 776 36 886