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. 2019 Jul 1;9:9439. doi: 10.1038/s41598-019-45823-7

Table 2.

Association results of the genetic variants showing a nominal significant signal for fasting glucose change (p < 0.05) in known T2D or glycemic trait locia.

SNP Chr BPb Locus EAb NEAb EAFb Beta SE P Directionc HetPVald N HetISq
Fasting glucose loci
rs6943153 7 50759073 GRB10 T C 0.30 −0.044 0.01 0.002 -------+- 0.4257 13,800 1
rs11619319 13 27385599 PDX1 A G 0.77 0.039 0.02 0.011 +++++−+++ 0.6785 13,807 0
Type 2 diabetes loci
rs10965248e 9 22122878 CDKN2A/B A G 0.18 −0.040 0.02 0.019 ?--+--+-- 0.06878 12,523 47
HbA1c loci
rs2073285 17 73628956 TMC6 T C 0.20 0.079 0.03 0.002 +?++?+?+? 0.05396 5,098 57
rs4783565 16 67307691 CDH3 A G 0.32 0.043 0.02 0.006 ?++++++?+ 0.4491 11,356 0
rs579459 9 135143989 ABO T C 0.78 −0.041 0.02 0.008 ------+-+ 0.2827 13,779 18
rs11619319 13 27385599 PDX1 A G 0.77 0.039 0.02 0.011 +++++−+++ 0.6785 13,807 0
rs10823343 10 70761019 HK1 A G 0.75 −0.037 0.02 0.039 -+-----?? 0.3766 8,809 6.7

aScott et al.13, Scott et al.15, Wheeler et al.16.

bBP:Physical Position (base pair) in build 36. EA: effect allele, NEA: non-effect allele, EAF: effect allele frequency.

cThe sign of EA effect and the order of Cohorts are BHS, COLAUS, DESIR, ERGO, FHS, HBCS, KORA, PREVEND, SARDIANA.

dHetPVal: P-value for testing for heterogeneity.

eUsing proxy SNP rs10965250 (r2 = 0.97 with rs10965248).