REAGENT or RESOURCE	SOURCE	IDENTIFIER
Antibodies
Sheep polyclonal anti-GFP	AbD Serotec	4745–1051; RRID:AB_619712
Rabbit polyclonal anti-GFP	Invitrogen	A11122; RRID: AB_221569
Rat monoclonal anti-GFP	Nacalai	04404–84; RRID: AB_10013361
Rabbit polyclonal anti-RFP	Rockland	600–401-379; RRID: AB_2209751
Rabbit polyclonal anti-DsRed	Clontech	632496; RRID: AB_10013483
Rabbit polyclonal anti-PKCγ	Santa cruz	sc-211; RRID: AB_632234
Rat monoclonal anti-Ctip2	Abcam	ab18465; RRID: AB_10015215
Mouse monoclonal anti-NeuN	Millipore	MAB377; RRID: AB_2298772
Guinea pig polyclonal anti-Vglut1	Millipore	AB5905; RRID: AB_2301751
Bacterial and Virus Strains
PRV152	L. Enquist (Princeton Univ)	N/A
PRV614	L. Enquist (Princeton Univ)	N/A
AAV1-Syn-EGFP-Cre	Penn vector core	AV-1-PV1848
AAV1-CAG-tdTomato	Penn vector core	AV-1-PV3365
EnvA-SADΔG-mcherry	E. Callaway and Gene Transfer, Targeting and Therapeutics Core (Salk Inst; Osakada et al., 2011)	Addgene #32636
AAV1-Syn-FLEX-TVA-2A-EGFP-2A-RVG	UNC vector core	Addgene #52473
AAV1-CAG-ChR2(H134R)-mCherry	Penn vector core	AV-1–20938M
AAV8-hSyn-DIO-hM4D(Gi)-mCherry	UNC vector core	Addgene #44362
Chemicals, Peptides, and Recombinant Proteins
Green Retrobeads IX	Lumafluor	N/A
Biotinylated dextran amine (10,000MW)	Invitrogen	D-1956
Fluorogold	Fluorochrome	N/A
Clozapine-N-oxide	Sigma-Aldrich	C0832–5MG
Experimental Models: Organisms/Strains
Mouse: Rbp4-Cre	GENSAT, MMRRC	MMRRC:031125-UCD; MGI:4367067
Mouse: En1-Cre	A. Joyner (Memorial Sloan Kettering Cancer Center; Kimmel et al., 2000)	MGI:2446434
Mouse: Chx10-Cre	Azim et al., 2014	N/A
Mouse: Chat-Cre	The Jackson Laboratory	JAX# 006410; MGI: 5475195
Mouse: Ptf1a-Cre	C. Wright(Vanderbilt Univ.; Kawaguchi et al., 2002)	MGI:2387804
Mouse: Isl1-Cre	The Jackson Laboratory	JAX# 024242; MGI:3623159
Mouse: Vglut3-Cre	The Jackson Laboratory	JAX# 018147; MGI:5316477
Mouse: Dbx1-Cre	A. Pierani (Institut Jacques Monod; Bielle et al., 2005)	MGI:3757955
Mouse: Atoh1-Cre	The Jackson Laboratory	JAX# 011104; MGI:3775845
Mouse: Olig3-Cre	Y. Nakagawa (Univ Minnesota; (Vue et al., 2009)	MGI:3841452
Mouse: Nkx2.2-Cre	L. Sussel (Columbia Univ.; (Balderes et al., 2013)	MGI:5538250
Mouse: Lmx1b-Cre	R. Johnson (Univ Texas; Li et al., 2010)	N/A
Mouse: CAG-lox-CAT-lox-EGFP	J. Robbins (Cincinnati Children’s Hospital Medical Center; Nakamura et al., 2006)	MGI:3849685
Mouse: CAG-lox-stop-lox-tdTomato (Ai14)	The Jackson Laboratory	JAX# 007914; MGI:3809524
Mouse: CAG-lox-stop-lox-synaptophysin-tdTomato (Ai34D)	The Jackson Laboratory	JAX# 012570; MGI:4947243
Mouse: Thy1-ChR2	G. Feng (MIT; Arenkiel et al., 2007)	MGI:3719486
Mouse: lox-stop-lox-histone GFP-2A-TVA-2A-G	Bourane et al., 2015	N/A
Software and Algorithms
ImageJ software	NIH	https://imagej.nih.gov/ij/
Graph-R software	S-NEXT	https://www.graph-project.com/
pClamp 10.4	Molecular Devices	https://www.moleculardevices.com/
Signal software	CED	http://ced.co.uk/us/products/sigovin
KinemaTracer	Kissei Comtec	https://www.kicnet.co.jp/solutions/biosignal/3d/kinematracer/