Table 5.
Primer sequences of flavonoid and chlorogenic acid biosynthetic pathways genes.
| Primer | Solyc ID | Abver | Sequence (5′-3′) |
|---|---|---|---|
| Phenylalanine ammonia-lyase 1 | Solyc10g086180.1 |
PALF PALR |
ACGGGTTGCCATCTAATCTGACA CGAGCAATAAGAAGCCATCGCAAT |
| Cinnamic acid 4-hydroxylase | Solyc05g047530.2 |
C4HF C4HR |
CCC AGT TTT TGG AAA TTG GCT TCA GCC CCA TTC TAA GCA AGA GAA CAT C |
| Chalcone synthase | Solyc05g053550.2 |
CHSF CHSR |
CAC CGT GGA GGA GTA TCG TAA GGC TGA TCA ACA CAG TTG GAA GGC G |
| Chalcone isomerase 2 | Solyc02g062170 |
CHIF CHIR |
GGC AGG CCA TTG AAA AGT TCC CTA ATC GTC AAT GAT CCA AGC GG |
| Flavanone 3-hydroxylase | Solyc02g083860.2 |
F3HF F3HR |
CCA AGG CAT GTG TGG ATA TGG ACC CCT GGA TCA GTA TGT CGT TCA GCC |
| Flavonol synthase 1 | Solyc11g013110.1 |
FLSF FLSR |
CCT CCT TCC TAC AGG GAA GCA AA CAA GCC CAA GTG ACA AGC TCC TAA |
| Dihydroflavonol 4-reductase | Solyc02g085020 |
DFRF DFRR |
TCA CAG GAG CAG CTG GAT TTA TCG TCA GGA TCA CGA ACA GTA GCA TGG |
| Flavonoid 3′ hydroxylase | Solyc11g066580 |
F3′HF F3′HR |
TGG GTA TAC CCA AAC TCA TTC CG AAA AGC CCA AAG TTG ATG TGA AAG G |
| Anthocyanin 1 transcription factor | Solyc10g086260 |
AN1F AN1R |
CCT CAA CCT CAG AAA TTC AGA AGC TCG TTG TTGTTG TCG TTC GAT GC |
| Anthocyanin 2 transcription factor | Solyc10g086250 |
AN2F AN2R |
ACAAGATGCCACTTTCCTTCACC TGTGCATCGTTGGGAGTTAGG |
| Hydroxycinnamoyl Co A shikimate hydroxycinnamoyl transferase | Solyc06g074710 |
HCTF HCTR |
TCT CCA ACC CCT TTT AAC GAA CC CAA CTT GTC CTT CTA CCA CAG GGA A |
| Hydroxycinnamoyl Co A quinate hydroxycinnamoyl transferase | Solycg07g005760 |
HQTF HQTR |
CCC AAT GGC TGG AAG ATT AGC TA CAT GAA TCA CTT TCA GCC TCA ACA A |
| p-coumarate 3-hydroxylase | Solyc10g078240 |
C3HF C3HR |
TTG GTG GCT ACG ACA TTC CTA AGG GGT CTG AAC TCC AAT GGG TTA TTC C |