Table III.
Transcription factor binding sites (TFBS) of lncRNA-ENST00000444102.
| Model | Factor | Strand | Start (bp) | End (bp) | Score |
|---|---|---|---|---|---|
| M00158 | COUP-TF, HNF-4 | − | 614 | 627 | 10.4 |
| M00923 | Adf-1 | + | 1,135 | 1155 | 9.4 |
| M00411 | HNF4α1 | + | 615 | 628 | 7.7 |
| M00034 | p53 | + | 909 | 928 | 7.5 |
| M00638 | HNF4α | − | 616 | 628 | 7.3 |
| M00401 | ABF1 | − | 942 | 968 | 7.2 |
| M00932 | Sp1 | − | 1,249 | 1,259 | 7.1 |
| M00932 | Sp1 | + | 1,388 | 1,398 | 7.1 |
| M00002 | E47 | − | 753 | 767 | 6.9 |
| M00034 | p53 | − | 909 | 928 | 6.9 |
| M00665 | Sp3 | + | 1,337 | 1,350 | 6.6 |
| M00761 | p53 decamer | + | 909 | 928 | 6.6 |
Τranscription factor binding sites (TFBS) of lncRNAs were predicted using the TRANSFAC database (http://www.gene-regulation.com). The higher the score, the more possibility of binding. This indicated that the factors of COUP-TF and HNF-4 may be the transcription factor binding sites (TFBS) of lncRNA-ENST00000444102.