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. 2019 May 29;7:1306. Originally published 2018 Aug 16. [Version 2] doi: 10.12688/f1000research.15830.2

Figure 3. t-SNE plot visualizing cluster assignments of cells.

Figure 3.

The clustering parameters can be changed using the sliders and re-plotted with the “Plot” button. Cells are projected into t-SNE space, with the first two t-SNE components as the axes of the plot. Cluster assignments of cells are defined by Louvain clustering and denoted as distinct colors.