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. 2019 Jul 5;9:9736. doi: 10.1038/s41598-019-45841-5

Figure 1.

Figure 1

ChIPseq, ATACseq, and bulk RNAseq showed significant enrichment of cell cycle transcripts following induction of Etv2 in the ES/EB system. (a) Venn diagram of the overlap between genes associated with Etv2 ChIPseq peaks25 and genes annotated to the cell cycle GO-classification. The significance was confirmed using the Fisher Exact Test. (b) Heat map of bulk RNAseq analyses of the previously published datasets10 using iHA-Etv2 ES/EBs showing increased expression of cell cycle genes in Dox-induced EBs relative to uninduced EBs. Note the increased expression of cell cycle genes following the induction of HA-Etv2 at both time points. (c) ATACseq analysis using iHA-Etv2 ESCs, D2 EBs, and D3 EBs following Dox treatment for 24 h. Note that there was significantly (p < 0.001) higher percentage of ATACseq peaks within the cell cycle genes as compared to background genes in the Dox-treated samples (***p < 0.001).