Table 1.
Adiponectin Loci in Sex-Combined and Sex-Specific Meta-analyses (Additive, adjBMI)
Variant | Chr | Position | Nearest Gene | Annotation | EA | EAF |
Sex-Combined |
Women |
Men |
Sex Diff. |
||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Effect | p | n | Effect | p | n | Effect | p | n | pa | |||||||
Loci Achieving Exome-wide Significance | ||||||||||||||||
rs2276853 | 3 | 47,282,303 | KIF9 | missense (p.Arg638Gly) | A | 0.594 | −0.033 | 3.35E−08 | 65,521 | −0.039 | 1.98E−06 | 31,788 | −0.029 | 4.18E−04 | 33,733 | 4.17E−01 |
rs3087866 | 3 | 49,054,692 | DALRD3 | missense (p.Gln299Arg) | C | 0.786 | −0.040 | 2.14E−08 | 65,521 | −0.034 | 5.88E−04 | 31,788 | −0.046 | 3.67E−06 | 33,733 | 3.86E−01 |
rs13133548 | 4 | 89,740,128 | FAM13A | intronic | A | 0.489 | −0.039 | 5.91E−12 | 65,521 | −0.033 | 3.24E−05 | 31,788 | −0.041 | 1.98E−07 | 33,733 | 4.61E−01 |
rs13107325 | 4 | 103,188,709 | SLC39A8 | missense (p.Ala391Thr) | T | 0.047 | 0.072 | 1.05E−07 | 59,606 | 0.078 | 1.13E−05 | 31,788 | 0.050 | 1.25E−02 | 33,733 | 2.98E−01 |
rs10282707 | 7 | 17,911,038 | SNX13 | intronic | T | 0.383 | −0.040 | 1.96E−10 | 56,826 | −0.024 | 1.07E−02 | 24,421 | −0.053 | 3.44E−10 | 32,405 | 2.00E−02 |
rs3735080 | 7 | 150,217,309 | GIMAP7 | missense (p.Arg83Cys) | T | 0.245 | −0.049 | 7.70E−13 | 65,521 | −0.036 | 2.72E−04 | 31,788 | −0.057 | 6.22E−10 | 33,733 | 1.05E−01 |
rs11993554 | 8 | 145,111,529 | OPLAH | synonymous (p.Phe612Phe) | G | 0.101 | 0.030 | 3.75E−03 | 61,431 | 0.076 | 9.76E−08 | 29,427 | −0.011 | 4.66E−01 | 32,004 | 2.52E−05 |
rs10861661 | 12 | 107,174,646 | RIC8B | intronic | C | 0.229 | −0.040 | 1.75E−09 | 59,489 | −0.035 | 4.74E−04 | 27,455 | −0.046 | 3.17E−06 | 32,034 | 4.42E−01 |
rs145119400 | 16 | 84,075,593 | SLC38A8 | missense (p.Pro57Leu) | A | 0.005 | −0.300 | 8.95E−13 | 59,107 | −0.306 | 1.78E−03 | 28,412 | −0.296 | 1.80E−10 | 30,695 | 9.23E−01 |
Previously Reported Loci Achieving Exome-wide Significance | ||||||||||||||||
rs2791552 | 1 | 219,652,033 | LYPLAL1 | intergenic | C | 0.676 | 0.676 | 1.75E−14 | 55,387 | −0.055 | 8.97E−09 | 26,391 | −0.054 | 7.16E−09 | 28,996 | 9.68E−01 |
rs2943641 | 2 | 227,093,745 | IRS1 | intergenic | C | 0.646 | 0.646 | 1.76E−21 | 65,521 | −0.048 | 2.21E−08 | 31,788 | −0.069 | 2.56E−16 | 33,733 | 7.30E−02 |
rs13303 | 3 | 52,558,008 | STAB1 | missense (p.Met2506Thr) | C | 0.569 | 0.569 | 2.69E−21 | 61,431 | 0.061 | 8.28E−13 | 29,427 | 0.060 | 4.74E−12 | 32,004 | 9.53E−01 |
rs17366568 | 3 | 186,570,453 | ADIPOQ | ncRNA/exonic | A | 0.118 | 0.118 | 1.43E−145 | 51,153 | −0.216 | 1.61E−64 | 31,788 | −0.239 | 5.86E−89 | 25,849 | 1.97E−01 |
rs4311394 | 5 | 53,300,662 | ARL15 | intronic | G | 0.257 | 0.257 | 1.68E−10 | 59,931 | −0.046 | 1.54E−06 | 28,914 | −0.044 | 3.84E−06 | 31,017 | 9.13E−01 |
rs7134375 | 12 | 20,473,758 | PDE3A | intergenic | A | 0.410 | 0.410 | 3.69E−20 | 65,521 | 0.054 | 2.88E−11 | 31,788 | 0.053 | 5.36E−11 | 33,733 | 9.14E−01 |
rs11057405 | 12 | 122,781,897 | CLIP1 | intronic | A | 0.086 | 0.086 | 2.90E−14 | 65,521 | −0.092 | 1.74E−10 | 31,788 | −0.068 | 1.24E−06 | 33,733 | 2.29E−01 |
rs11057353 | 12 | 124,265,687 | DNAH10 | missense (p.Ser167Pro) | C | 0.645 | 0.645 | 2.74E−19 | 65,521 | 0.061 | 3.47E−13 | 31,788 | 0.047 | 2.19E−08 | 33,733 | 2.17E−01 |
rs2925979 | 16 | 81,534,790 | CMIP | intronic | C | 0.693 | 0.693 | 1.38E−37 | 61,801 | 0.093 | 6.72E−26 | 29,767 | 0.072 | 1.91E−16 | 32,034 | 8.80E−02 |
rs3865188 | 16 | 82,650,717 | CDH13 | intergenic | T | 0.472 | 0.472 | 1.14E−08 | 59,420 | −0.042 | 7.28E−07 | 28,616 | −0.027 | 1.11E−03 | 30,804 | 2.27E−01 |
rs4805885 | 19 | 33,906,123 | PEPD | intronic | C | 0.603 | 0.603 | 2.85E−25 | 61,431 | 0.076 | 4.63E−19 | 29,427 | 0.052 | 5.77E−28 | 32,004 | 5.20E−02 |
Loci achieving exome-wide significance (p < 2E−07) in sex-combined and/or sex-specific all-ancestry meta-analyses. Beta effect size from an additive model corresponding to the effect allele for inverse-normal transformed adiponectin levels adjusted for age, BMI, and other study-specific covariates. The smallest p value for each variant is shown in bold. Physical positions based on hg19. Abbreviation: Chr, chromosome; EA, effect allele; EAF, effect allele frequency; n, sample size.
Test for sex difference; values significant at the table-wide Bonferroni threshold of 0.05/20 = 2.5E−03