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. 2019 Jun 13;105(1):29–47. doi: 10.1016/j.ajhg.2019.05.004

Table 1.

Association Analyses between Individual SNPs and CRC Risk in the Discovery, Replication, and Combined Samples

SNP Genotypes Discovery Phase
Replication Phase
Combined Study
Affected/controls OR (95% CI) P value Affected/controls OR (95% CI) P Value Affected/controls OR (95% CI) P value
dbSNP: rs61926301 GG 538/649 1.00 (reference) 2,133/4,389 1.00 (reference) 2,671/5,038 1.00 (reference)
GT 787/712 1.30 (1.12–1.52) 8.05 × 10−4 2,003/3,567 1.16 (1.08–1.25) 9.08 × 10−5 2,790/4,279 1.24 (1.16–1.32) 6.46 × 10−10
TT 177/129 1.59 (1.23–2.06) 4.31 × 10−4 553/910 1.26 (1.12–1.42) 1.26 × 10−4 730/1,039 1.33 (1.19–1.48) 1.63 × 10−7
Dominant 1.35 (1.16–1.56) 9.06 × 10−5 1.18 (1.10–1.27) 4.01 × 10−6 1.25 (1.18–1.34) 3.33 × 10−12
Recessive 1.37 (1.07–1.74) 1.12 × 10−2 1.17 (1.05–1.31) 5.29 × 10−3 1.20 (1.08–1.33) 4.29 × 10−4
Additive 1.28 (1.14–1.43) 2.92 × 10−5 1.14 (1.08–1.20) 2.26 × 10−6 1.18 (1.13–1.24) 7.97 × 10−12
dbSNP: rs7959129 GG 505/630 1.00 (reference) 1,686/3,583 1.00 (reference) 2,191/4,213 1.00 (reference)
GT 753/668 1.38 (1.18–1.63) 7.46 × 10−5 2,208/3,965 1.17 (1.08–1.27) 7.31 × 10−5 2,961/4,633 1.21 (1.13–1.30) 9.03 × 10−8
TT 259/212 1.49 (1.19–1.85) 4.49 × 10−4 795/1,318 1.30 (1.17–1.45) 1.58 × 10−6 1,054/1,530 1.32 (1.20–1.46) 9.25 × 10−9
Dominant 1.40 (1.20–1.63) 1.54 × 10−5 1.20 (1.12–1.30) 1.05 × 10−6 1.24 (1.16–1.32) 3.00 × 10−10
Recessive 1.24 (1.01–1.51) 3.94 × 10−2 1.19 (1.08–1.31) 4.83 × 10−4 1.19 (1.09–1.30) 1.02 × 10−4
Additive 1.25 (1.13–1.39) 3.28 × 10−5 1.15 (1.09–1.21) 1.72 × 10−7 1.16 (1.11–1.22) 1.17 × 10−10

Abbreviations are as follows: OR = odds ratio and CI = confidence interval.

The calculation of ORs and 95% CIs was conducted under assumption that variant alleles were risk alleles.

All p values were calculated with an unconditional logistic regression model after adjusting for gender, age group, smoking status, and drinking status.