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. 2019 Jul 5;35(14):i81–i89. doi: 10.1093/bioinformatics/btz341

Fig. 1.

Fig. 1.

Conceptual overview of the PSI approach. A sequence graph and a set of reads are provided as inputs (yellow). The graph is preprocessed to create a path index (left/dark blue). The read set is split into chunks and seeds are indexed (right/red). Seed finding proceeds in two stages (middle/light blue)