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. 2019 Jul 5;35(14):i200–i207. doi: 10.1093/bioinformatics/btz376

Fig. 1.

Fig. 1.

Chaining of tandem repeat anchors. Three arrows represent three copies of a template sequence. Vertical line represents seed for each k-mer. The same height between seeds indicates identical k-mers. Horizontal line represents tandem repeat hit of identical k-mers. Solid and dashed lines indicate their hit distances are likely and unlikely, respectively, to be the true repeat pattern size. After the dynamic programming, the optimal chain is expected to consist of anchors that have hit distances close to the repeat pattern size