REAGENT or RESOURCE	SOURCE	IDENTIFIER
Antibodies
Mouse anti-GFP	Invitrogen	Cat# A11120; RRID: AB_221568
Rabbit anti-GFP	Invitrogen	Cat# A6455; RRID: AB_221570
Rabbit anti-PV	Swant	Cat# PV 25; RRID:AB_10000344
Rabbit anti-RFP	Rockland	Cat# 600-401-379; RRID:AB_2209751
Rabbit anti-PSD95	AbCam	Cat# ab18258; RRID:AB_444362
Guinea pig anti-VGLUT1	Millipore	Cat# AB5905; RRID:AB_2301751
Guinea pig anti-VGLUT2	Millipore	Cat# AB2251; RRID:AB_1587626
Bacterial and Virus Strains
AAV 1/2-FLEX-GFP	Murray et al., 2011	N/A
Chemicals, Peptides, and Recombinant Proteins
Isoflurane	Baxter	Cat# FDG9623;
Paraformaldehyde	Sigma-Aldrich	Cat# 441244; CAS: 30525-89-4
Glutaraldehyde 25%	Roth	Cat# 3778.1; CAS: 111-30-8
Triton X-100	Fisher BioReagents	Cat# BP151-500; CAS: 9002-93-1
DAPI	Sigma-Aldrich	Cat# 32670; CAS: 28718-90-3
Mowiol	Sigma-Aldrich	Cat# 81381; CAS: 9002-89-5
SlowFade Gold	Thermo Fisher	Cat# S36937
Vicia villosa lectin	Vector Laboratories	Cat# B-1235; RRID:AB_2336855
Alexa647-conjugated streptavidin	Jackson ImmunoResearch	Cat# 016-600-084; RRID:AB_2341101
Osmium (VIII) oxid	Merck	Cat#: 1245050500 CAS: 20816-12-0
1,2-propylenoxid	Merck	Cat#: 8070270100 CAS: 75-56-9
Araldite M	Sigma-Aldrich	Cat#: 10951
Araldit M accelerator 960	Sigma-Aldrich	Cat#: 10952
Uranylacetate	Merck	Cat#: 108473 CAS: 6159-44-0
Tetrodotoxin citrate	Hello Bio	Cat#: HB1035 CAS: 18660-81-6
QX 314 bromide	Hello Bio	Cat#: HB1029 CAS: 24003-58-5
Experimental Models: Cell Lines
293 [HEK293]	ATCC	CRL-1573
Experimental Models: Organisms/Strains
Mouse: B6;129P2-Pvalbtm1(cre)Arbr/J	The Jackson Laboratory	JAX stock #008069
Mouse: B6.Cg-Gt(ROSA)26Sortm9(CAG-tdTomato)Hze/J	The Jackson Laboratory	JAX stock #007909
Software and Algorithms
ZEN 2 (blue edition)	ZEISS	https://www.zeiss.com/microscopy/int/products/microscope-software/zen-lite.html RRID:SCR_013672
LSM 510 version 3.2 SP2	ZEISS	https://www.zeiss.com/microscopy/int/downloads.html
NeuronStudio	Wearne et al., 2005, Rodriguez et al., 2008	https://icahn.mssm.edu RRID:SCR_013798
Imaris 8	Bitplane	https://imaris.oxinst.com/packages
GraphPad Prism 6	GraphPad Software	https://www.graphpad.com/ RRID:SCR_002798
MATLAB R2015a	MathWorks	https://www.mathworks.com/products/matlab.html RRID:SCR_001622
Patchmaster 90.3	Heka	http://www.heka.com/products/products_main.html#soft_pm RRID:SCR_000034
pCLAMP 10.5.2.6 Clampfit	Molecular Devices	https://www.moleculardevices.com/products/software/pclamp.html RRID:SCR_011323