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. Author manuscript; available in PMC: 2019 Jul 8.
Published in final edited form as: Nat Rev Mol Cell Biol. 2019 Jun;20(6):353–367. doi: 10.1038/s41580-019-0108-4

Table 1.

General Principles for activity screening strategies

Technology Mode Principle Application examples
Cell based assays In vitro Metabolite-induced cellular phenotype (e.g. cell migration) is quantified 140
Expression screening In vitro Metabolite-induced protein or transcript expression is quantified 14
Metabolite binding screening on protein arrays In vitro Metabolite-protein interactions are profiled 83,84
Chemical proteomics In vitro Metabolite-protein interactions are profiled 8386
In vivo administration and phenotype screening In vivo Metabolite-induced molecular and patho-physiological phenotypes of model organisms are quantified 141
Mathematical modeling In silico Mass balance or neuronal networks are used to predict most active metabolites 91
Cognitive computing In silico Active metabolites are predicted based on previous studies 142