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. 2019 Jun 21;18(2):1657–1668. doi: 10.3892/ol.2019.10508

Table IV.

miRNA candidates targeting the RPTOR gene predicted by bioinformatics analysis.

Database algorithm

miRNA ID Proposed target gene Ensembl gene ID miRNA sequence Diana miRWalk TargetScan PicTar miRDB
hsa-miR-340-3p RPTOR ENSG00000141564 UCCGUCUCAGUUACUUUAUAGC Score 0.79 63
P-value 0.03 0.008 Rank 9
Binding 9mer 9mer 9mer
Region UTR3 UTR3 UTR3
hsa-miR-548o-3p RPTOR ENSG00000141564 CCAAAACUGCAGUUACUUUUGC Score 0.71
P-value 0.002 0.008
Binding 9mer 9mer
Region UTR3 UTR3
hsa-miR-3121-3p RPTOR ENSG00000141564 UAAAUAGAGUAGGCAAAGGACA Score 0.997 64
P-value 0.10 Rank 6
Binding 8mer 7mer
Region UTR3 UTR3
hsa-miR-4802-3p RPTOR ENSG00000141564 UACAUGGAUGGAAACCUUCAAGC Score 0.83 66
P-value 0.04 Rank 4
Binding 8mer 7mer
Region UTR3 UTR3
hsa-miR-2114-3p RPTOR ENSG00000141564 CGAGCCUCAAGCAAGGGACUU Score 0.73 67
P-value 0.02 Rank 3
Binding 8mer 7mer
Region UTR3 UTR3
hsa-miR-3183 RPTOR ENSG00000141564 GCCUCUCUCGGAGUCGCUCGGA Score 0.71 77
P-value 0.003 Rank 1
Binding 7mer 7mer
Region UTR3 UTR3
hsa-miR-654-5p RPTOR ENSG00000141564 UGGUGGGCCGCAGAACAUGUGC Score 59
P-value 0.008 Rank 13
Binding 9mer 7mer
Region UTR3 UTR3

miRNA, microRNA; miR, microRNA; UTR3, 3 untranslated region; RPTOR, regulatory-associated protein of mTOR complex I.