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| Description | Symbol | Dimension |
|---|---|---|
| Number of observations | nb | Scalar |
| Overall number of mutations | nm | Scalar |
| Mutation matrix | M | nb × nm |
| Number of fixed effects | nf | Scalar |
| Fixed effects matrix | F | nb × nf |
| Number of plates | np | Scalar |
| Plate number vector | r | nb |
| Phenotypic value vector | y | nb |
