TABLE 2.
Dimorphic transition-associated genes found in ΔbrlA and ΔabaA transcriptomes
| Gene category and namea |
Tag locusb | Annotation | ΔbrlA/WT |
ΔabaA/WT |
||
|---|---|---|---|---|---|---|
| log2 R | Padjusted | log2 R | Padjusted | |||
| Central developmental pathway | ||||||
| brlA | BBA_07544 | C2H2 transcription factor BrlA | −6.215 | 0.0000 | ||
| abaA | BBA_00300 | Conidiation factor AbaA | −1.991 | 0.0000 | ||
| wetA | BBA_06126 | Conidial maturation factor WetA | −0.730 | 0.0065 | −0.794 | 0.0008 |
| vosA | BBA_01023 | Velvet protein VosA | −0.500 | 0.0815 | −1.851 | 0.0000 |
| Putative dimorphic switch genes | ||||||
| cdc42 | BBA_01874 | Cell division control protein 42 | 0.315 | 0.3189 | −0.334 | 0.1225 |
| drkA | BBA_01218 | Group III histidine kinase HK3 | 0.568 | 0.0299 | −0.244 | 0.2699 |
| pakA | BBA_07438 | PAK kinase | −0.247 | 0.4557 | −0.442 | 0.0418 |
| pakB | BBA_04136 | Protein kinase CHM1 | 0.110 | 0.7880 | −0.309 | 0.1519 |
| racA | BBA_08808 | Small GTPase, Rho type | 0.342 | 0.2468 | 0.133 | 0.5968 |
| ras1 | BBA_04387 | Ras GTPase 1 (Ras1) | −0.274 | 0.4143 | −0.235 | 0.3013 |
| ras2 | BBA_04671 | Ras GTPase 2 (Ras2) | −0.311 | 0.5188 | −0.441 | 0.0713 |
| ryp1 | BBA_06411 | Protein Ryp1 | 0.142 | 0.9702 | −1.126 | 0.0004 |
| ryp2 | BBA_05501 | Protein Ryp2 | 0.462 | 0.1065 | 0.226 | 0.3463 |
| MAPK cascaded pathways | ||||||
| ste11 | BBA_02280 | MAPK kinase kinase Ste11 | 0.835 | 0.0011 | 0.821 | 0.0040 |
| ste7 | BBA_04254 | MAPK kinase Ste7 | −0.355 | 0.2180 | −0.543 | 0.0077 |
| fus3 | BBA_01244 | MAPK Fus3 | −0.250 | 0.4698 | −0.101 | 0.6658 |
| ssk2 | BBA_00937 | MAPK kinase kinase Ssk2 | 0.027 | 0.9620 | 0.076 | 0.7790 |
| pbs2 | BBA_02330 | MAPK kinase Pbns2 | 0.050 | 0.9158 | −0.026 | 0.9326 |
| hog1 | BBA_05209 | MAPK Hog1 | 0.814 | 0.0298 | 1.207 | 0.0240 |
| bck1 | BBA_01318 | MAPK kinase kinase Bck1 | −0.065 | 0.8808 | −0.300 | 0.1701 |
| mkk1 | BBA_01095 | MAPK kinase Mkk1 | −0.109 | 0.7935 | −0.135 | 0.5861 |
| slt2 | BBA_03334 | MAPK Slt2 | −1.079 | 0.0000 | −0.481 | 0.0169 |
Putative dimorphic switch genes are homologous to those of human mycopathogens listed in a review (18).
Gene accession codes in B. bassiana genome under the NCBI accession no. NZ_ADAH00000000.