. 2019 Jul 9;11:100. doi: 10.1186/s13148-019-0695-0

Table 1.

Altered CGI flanking region in pilocytic astrocytoma

UCSC CGI	UCSC CGI name	CTCF binding site	Relation to UCSC CGI	Δβ value (PA-control)	Genes within region	Gene promoter-associated N-shelf
chr5:140871064-140872335	CpG 122	chr5:140870147-140872480	N-shelf	− 0.285	PCDHGA1, PCDHGA10, PCDHGA11, PCDHGA12, PCDHGA2, PCDHGA3, PCDHGA4, PCDHGA5, PCDHGA6, PCDHGA7, PCDHGA8, PCDHGA9, PCDHGB1, PCDHGB2, PCDHGB3, PCDHGB4, PCDHGB5, PCDHGB6, PCDHGB7, PCDHGC3, PCDHGC4, PCDHGC5	PCDHGC5
chr5:140871064-140872335	CpG 122	chr5:140871308-140873492	N-shelf	− 0.285		PCDHGC5

Note: CGI CpG island, PA pilocytic astrocytoma. CpG 122 corresponds to UCSC CGI name