Fig 3. Concatenated alignment showing the 84 SNPs, with their position in the whole genome alignment of all sequenced individuals with the L. decidua reference.

The 22 non-unique SNPs are shaded in gray. If a SNP is located within a gene or intron the corresponding gene name is given in the first row. Non-synonymous SNPs are marked by an asterisk (*). The nucleotides are shown in different colors (A = green, T = blue, C = purple, G = black).