Skip to main content
. 2019 Jul 11;20(Suppl 7):536. doi: 10.1186/s12864-019-5847-2

Table 2.

Occurrence of chimeric BC–ROI combinations under different PCR conditions for high-diversity MPRA libraries

Type of PCR Elongation time, sa MPRA library Total read count Reads with chimeric BC–ROI combinations, %
name sizeb R#1 R#2 R#1 R#2
emulsion 10 library-71 22,621 526,056 497,217 0.580 0.555
30 library-71 51,650 594,511 514,941 0.342 0.310
30 library-83 38,156 371,889 456,380 0.261 0.304
conventional 30 library-71 85,249 776,878 784,138 0.336 0.337
30 library-83 52,654 788,801 809,402 0.295 0.310

aIndicated elongation time was used in both rounds of PCR

bThe number of genuine BCs found in both replicates

R#1 and R#2 stand for replicate 1 and replicate 2, respectively