Antibodies |
Mouse anti-SEPT9 |
EMD Millipore |
Cat#MABE992 |
Rabbit anti-septin 9 |
PTG labs |
Cat#10769 – IAP; RRID:AB_2185012 |
Mouse anti-α-tubulin (DM1α) |
Sigma |
Cat#T6199; RRID:AB_477583 |
Rabbit anti-Septin 2 (clone: a5N5) |
Kind gift form M. Kinoshita (Nagoya University, Japan) |
N/A |
Rabbit anti-Septin 6 |
Kind gift form M. Kinoshita (Nagoya University, Japan) |
N/A |
Rabbit anti-Septin 7 |
IBL America |
Cat#18991; RRID:AB_1630825 |
Rabbit anti-CHMP4B |
PTG labs |
Cat# 15669-1-AP |
Mouse anti-TSG101 (clone C-52) |
Santa Cruz |
Cat# sc-7964, RRID:AB_671392 |
Mouse anti-ALIX |
Santa Cruz |
Cat# sc-53540, RRID:AB_673819 |
Rabbit anti-VPS25 |
Abclonal |
Cat# A13132, RRID:AB_2759982 |
Rabbit anti-VPS22 |
Abclonal |
Cat# A10583, RRID:AB_2758124 |
Rabbit anti-CHMP2B |
Abclonal |
Cat# A13410, RRID:AB_2760272 |
Rabbit anti-TSG101 |
PTG labs |
Cat# 14497-1-AP, RRID:AB_2208090 |
Rabbit anti-CHMP6 |
PTG labs |
Cat# 16278-1-AP, RRID:AB_2079498 |
Rabbit anti-VPS25 |
PTG labs |
Cat# 15669-1-AP, RRID:AB_2215019 |
Mouse anti-mCherry |
Abcam |
Cat# |
Mouse anti-His tag |
Qiagen |
Cat# Cat# 34440, RRID:AB_2714179 |
Rabbit anti-CHMP4B |
Santa Cruz |
Cat# sc-134946, RRID:AB_10608470 |
Rabbit anti-GST |
Santa cruz |
Cat# sc-459, RRID:AB_631586 |
goat-anti rabbit IRDye® 680RD |
LI-COR |
Cat# 925-68071; RRID:AB_2721181 |
goat anti-mouse IRDye® 800RD |
LI-COR |
Cat# 925-32210; RRID:AB_2687825 |
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Bacterial and Virus Strains |
Escherichia coli BL21 (DE3) |
Invitrogen |
Cat#C600003 |
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Chemicals, Peptides, and Recombinant Proteins |
Purified 6XHis-hSEPT9 (GenBank accession number NP_001106963; isoform a ) protein |
[44] |
N/A |
Purified 6XHis-hSEPT9 Δ(PTAP)2x
|
This paper |
N/A |
GST-TSG101-UEV |
This paper |
N/A |
Ni-NTA agarose beads |
Macherey-Nagel |
Cat# 745400.25 |
Glutathione agarose beads |
Thermo Scientific |
Cat# 16100 |
RFP-Trap®_A beads |
ChromoTek |
Cat# rta-10 |
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Critical Commercial Assays |
Quick Change II site-mutagenesis kit |
Agilent Technologies |
Cat#200523 |
Duolink® PLA – Protein Detection Technology |
Sigma - Aldrich |
Cat# DUO92101-1KT |
Zenon™Alexa Fluor™ 568 Rabbit IgG Labeling Kit
|
ThermoFisher Scientific |
Cat# Z-25306; RRID:AB_2736952 |
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Experimental Models: Cell Lines |
Madin Darby kidney canine epithelia cells (MDCK) II/G |
Kind gift from J. Nelson, Stanford University, CA |
ECACC #00062107 |
MDCK mCherry- SEPT9 |
[42] |
N/A |
MDCK mCherry- SEPT2 |
[13] |
N/A |
MDCK SEPT2-YFP |
[12] |
N/A |
MDCK GFP-SEPT6 |
This paper |
N/A |
MDCK GFP-CHMP4B |
This paper |
N/A |
|
|
|
Oligonucleotides – see Table S1 for sequences of primers used for this study |
|
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Recombinant DNA |
GFP-TSG101 |
Kind gift from Dr. Paul Bieniasz (The Rockefeller University, NY) |
N/A |
GFP-CHMP4B |
Kind gift from Dr. Paul Bieniasz, The Rockefeller University, NY |
N/A |
GFP-CHMP2A |
Addgene |
Cat# 31805 , deposited by the Daniel Gerlich Lab |
CHMP6-GFP |
Addgene |
Cat #31806 , deposited by the Daniel Gerlich Lab |
GFP-VPS25
|
Kind gift from Dr. Natalie Elia, Ben Gurion University of Negev, Israel [20] |
N/A |
GFP-VPS36 |
Kind gift from Dr. Natalie Elia, Ben Gurion University of Negev, Israel [20] |
N/A |
GFP-VPS22 |
Kind gift from Dr. Natalie Elia, Ben Gurion University of Negev, Israel [20] |
N/A |
pEGFP-C1-VPS4
|
Kind gift from Dr. Wes Sundquist, University of Utah School of Medicine, UT |
N/A |
pEGFP-C1-α-tubulin |
Kind gift from J. Nelson, Stanford University, CA [13] |
N/A |
pBiFC-VN173 |
Addgene |
Cat#22010 deposited by the Chang-Deng Hu lab |
pBiFC-VC155 |
Addgene |
Cat#22010 deposited by the Chang-Deng Hu lab |
SEPT9_VN |
This paper |
N/A |
TSG101_VC |
This paper |
N/A |
TSG101_VN |
This paper |
N/A |
pmCherry-C1-SEPT2 |
[13] |
N/A |
pmCherry -C1-SEPT9 |
[42] |
N/A |
pYFP-N1- (mouse) SEPT2 |
[12] |
N/A |
pEGFP-C3-SEPT6 |
[43] |
N/A |
pmCherry-N-hSEPT9 |
[42] |
N/A |
pGFP-VR-S-canine S9 shRNA-rescuehSEPT9-FL-mCherry |
This paper |
N/A |
pGFP-VR-S-canine S9 shRNA1-rescuehSEPT9-Δ(PTAP)2x -mCherry |
This paper |
N/A |
GST-TSG101 UEV |
This paper |
N/A |
His-hSEPT9 |
[44] |
N/A |
His-hSEPT9- Δ(PTAP)2x
|
This paper |
N/A |
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Software and Algorithms |
Slidebook |
3i |
https://www.intelligent-imaging.com/ ; RRID:SCR_014300 |
Fiji (ImageJ) |
NIH |
https://imagej.nih.gov/ij/ ; RRID:SCR_002285 |
GraphPad Prism |
GraphPad |
https://www.graphpad.com/scientific-software/prism/ ; RRID:SCR_002798 |
MATLAB |
MATLAB |
http://www.mathworks.com/products/matlab/; RRID:SCR_001622 |