Table 2.

Up- or down-regulated Foc genes during infection compared to germinating conidia and mycelia

Fold Changea	WT 0 vs 24 h		WT 0 vs 120 h		InVir 0 vs 24 h		InVir 0 vs 120 h
	Up	Down	Up	Down	Up	Down	Up	Down
4	721	1472	644	724	837	1418	835	740
16	521	1309	600	685	508	1187	691	650
64	322	1147	431	587	306	994	392	518
256	196	1069	265	534	183	913	224	401
≥1024	88	387	131	224	74	392	76	153

^aFold changes in gene expression during early and late infection stages were calculated by comparing FPKM values of individual genes in infected roots with the average FPKM values of the corresponding genes in spores and mycelia