Skip to main content
. 2019 Jul 10;20:570. doi: 10.1186/s12864-019-5949-x

Table 3.

DEGs annotated with function of transposition

GeneID InVir 0 h vs 24 h InVir 0 h vs 120 h WT 0 h vs 24 h WT 0 h vs 120 h Blast nr BP
log2
Ratio		 R a P b log2
Ratio		 R P log2
Ratio		 R P log2
Ratio		 R P

CL1911.

Contig2_All

 3.54 Up 0.8 4.52 Up 0.8 2.57 Up 0.8 4.06 Up 0.8 transposase-like protein –

CL1809.

Contig3_All

 8.35 Up 0.7 9.24 Up 0.8 10.12 Up 0.9 8.8 Up 0.8 transposase DNA integration

CL119.

Contig2_All

 4.1 Up 0.8 3.96 Up 0.8 6.07 Up 0.8 6.12 Up 0.8 restless-like transposase –

CL1911.

Contig1_All

 3.73 Up 0.8 3.69 Up 0.8 1.34 Up 0.7 2.63 Up 0.8 transposase-like –

CL126.

Contig4_All

 −1.65 Down 0.6 −1.9 Down 0.6 −9.11 Down 0.8 −3.47 Down 0.7 putative transposase –

CL730.

Contig6_All

 −0.83 Down 0.5 −2.47 Down 0.7 −0.7 Down 0.5 −9.65 Down 0.9 transposase –

Unigene

13826_All

 2.07 Up 0.6 7 Up 0.9 −3.42 Down 0.3 7.51 Up 0.9 retrotransposase DNA integration

CL361.

Contig32_All

 9.88 Up 0.9 9.38 Up 0.9 −6.01 Down 0.5 2.42 Up 0.6 transposase –

Unigene

14252_All

 10.02 Up 0.9 7.31 Up 0.6 −5.4 Down 0.4 −5.37 Down 0.4 transposase –

CL2135.

Contig4_All

 10.3 Up 0.9 6.83 Up 0.6 −6.77 Down 0.6 2.93 Up 0.7 restless-like transposase –

Unigene

1211_All

 −4.12 Down 0.3 5.76 Up 0.9 −5.06 Down 0.4 5.66 Up 0.8 retrotransposase DNA integration

aUp-Down-Regulation

bProbability