Table 5.
The results of basal-like type specific regulatory modules obtained by CONFIGURE
| Regulatory Module | Target Gene | FIS | Status | Evidence |
|---|---|---|---|---|
| POU5F1(-) | TOX3 | 0.1328 | down-regulated | [38, 39] |
| RALGPS2 | ||||
| FUT8 | ||||
| HMGCR | ||||
| FOXA1 | ||||
| ZIC1(-) | XBP1 | 0.1072 | down-regulated | |
| OVOL1 | ||||
| SLC1A4 | ||||
| SMAD7 | ||||
| CNTN1 | ||||
| RARA(+) | RARA | 0.0827 | down-regulated | |
| STARD3 | ||||
| PLEKHH3 | ||||
| MAG | ||||
| PCGF2 | ||||
| E2F3(+) | E2F3 | 0.0667 | up-regulated | |
| ANP32E | ||||
| GEN1 | ||||
| SYNCRIP | ||||
| BEND3 | ||||
| GATA6(-) | MAST4 | 0.058 | down-regulated | [40] |
| PDE6B | ||||
| ROBO2 | ||||
| KIF5A | ||||
| ABI2 | ||||
| PHOX2B(+) | PHOX2B | 0.0454 | up-regulated | |
| DDC | ||||
| MSGN1 | ||||
| AKR1D1 | ||||
| FABP7 | ||||
| GLI3(-) | PPIF | 0.0447 | up-regulated | [41] |
| ELF5 | ||||
| ORAI1 | ||||
| POR | ||||
| HMGA1 | ||||
| ETV6(+) | PHB2 | 0.0346 | up-regulated | |
| NCAPD2 | ||||
| VANGL2 | ||||
| PLEKHA5 | ||||
| ETV6 | ||||
| SRF(-) | PAIP2 | 0.0344 | down-regulated | [37, 42] |
| ERLEC1 | ||||
| NECAP1 | ||||
| SCRN3 | ||||
| ZFP62 | ||||
| PLAGL1(-) | SLC25A17 | 0.0327 | down-regulated | |
| NPBWR2 | ||||
| PTK6 | ||||
| SYCE2 | ||||
| HN1L |