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. 2019 Jul 11;8(28):e00735-19. doi: 10.1128/MRA.00735-19

TABLE 1.

Characteristics and accession numbers of genome sequences of S. pseudintermedius bacteremia isolatesa

Isolate Source No. of contigs No. of scaffolds BUSCO (%) N50 (bp) Genome size (bp) G+C content (%) GenBank accession no. SRA accession no.
MinION FastQ MinION Fast5 MiSeq
Tamu 46_57 Canine 13 2 99.20 638,705 2,561,987 37.7 SEZZ00000000 SRR8538958 SRR9211302 SRR8538959
Tamu 49_44 Canine 20 1 98.70 385,638 2,583,863 37.67 CP035743 SRR8538960 SRR9211301 SRR8538961
Tamu 50_21 Canine 7 2 99.60 1,401,107 2,527,337 37.74 SEZY00000000 SRR8538954 SRR9211304 SRR8538955
Tamu 51_92 Canine 1 1 99.60 2,512,263 2,512,263 37.8 CP035742 SRR8538956 SRR9211303 SRR8538957
Tamu 53_58 Human 24 2 99.60 238,709 2,655,352 37.42 SEZX00000000 SRR8538952 SRR9211298 SRR8538953
Tamu 53_60 Human 1 1 99.60 2,615,859 2,615,859 37.47 CP035741 SRR8538946 SRR9211297 SRR8538947
Tamu 53_63 Human 29 3 99.60 191,852 2,628,670 37.59 SEZW00000000 SRR8538948 SRR9211300 SRR8538949
Tamu 53_88 Human 5 1 99.60 1,396,228 2,593,641 37.69 CP035740 SRR8538950 SRR9211299 SRR8538951
a

BioProject accession number PRJNA521119.