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. 2019 Jul 11;19:141. doi: 10.1186/s12862-019-1467-3

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© The Author(s). 2019

Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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Fig. 5 — Phylogeny of wild tomato SlLYK8 and SlLYK9 orthologs with intact kinases. This phylogeny includes BLAST hits for Solanum lycopersicum LysM-RLKs SlLYK8 and SlLYK9 which extend past the point of SlLYK8 truncation. The phylogeny and 500 bootstrap replicates were inferred using RAxML under the GTRGAMMA model and seed values of 100 and rooted using the method of Minimal Ancestor Deviation [27]. The scale bar indicates nucleotide substitutions per site. Three sequences from Solanum peruvianum and Solanum chilense with intact kinase domains share more recent ancestry with SlLYK8 than with SlLYK9 and show the greatest percent identity with SlLYK8