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. 2019 Jul 1;15(7):e1007082. doi: 10.1371/journal.pcbi.1007082

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© 2019 Chen et al

This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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Fig 4 — Residual RTs after DART-ID alignment for (a) label-free dataset [57] and TMT-labelled dataset [58]. (b) DART-ID doubles the PSMs at 0.01% FDR and increase them by about 40% at 1% FDR. Each circle corresponds to the number of PSMs in an LC-MS/MS run. (c) Number of PSMs per run at 1% FDR, after applying DART-ID versus before its application. The x-coordinate represents the Spectra PSMs and and y-coordinate represents the DART-ID PSMs at 1% FDR.