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. 2019 Jul 10;7:e7261. doi: 10.7717/peerj.7261

Table 3. Up_Down quantification relationship of transcriptomics and proteomics.

Transcriptomics proteomics
Protein accession Protein description logFC (Wh/Gr) p-value q-value Regulated Type Wh/Gr Ratio Wh/Gr P value Regulated type
Aco000471.1 Putative L-ascorbate peroxidase 6 3.976 0.00047367 0.01422146 _Up 0.473 0.0000161 Down_
Aco005951.1 ”Chlorophyll a-b binding protein 2.538 9.3709E−11 2.2658E−08 _Up 0.096 0.0121 Down_
Aco006504.1 ”Preprotein translocase subunit SECY 1.038 9.4357E−05 0.00405446 _Up 0.404 0.0000372 Down_
Aco008453.1 Chloroplastic lipocalin 1.198 0.00026127 0.00899766 _Up 0.521 0.000000311 Down_
Aco013684.1 ”PsbP domain-containing protein 1 1.368 7.7316E−05 0.0034582 _Up 0.236 0.0000624 Down_
Aco018356.1 ”Divinyl chlorophyllide a 8-vinyl-reductase 1.156 0.00013306 0.00531348 _Up 0.317 0.00000147 Down_
Aco021970.1 ”Photosynthetic NDH subunit of lumenal location 3 1.580 0.00097191 0.02464119 _Up 0.162 0.00000133 Down_
Aco023399.1 ”Rhodanese-like domain-containing protein 14 1.157 0.00193652 0.04114251 _Up 0.479 0.000103 Down_
Aco024665.1 ”Lycopene beta cyclase 1.355 2.2429E−05 0.00126599 _Up 0.714 0.0279 Down_

Notes.

Protein accession numbers can be found at https://phytozome.jgi.doe.gov/pz/portal.html.