Table 2.
Name | Type | Sequence (5′→3′) | Length (bp) |
---|---|---|---|
Ab-primers | F3 | GAGGAGCATGCCTGTTTG | 18 |
B3 | GGTCAGACAGTTAGGGTTAG | 20 | |
FIP | CCTGCAACTCCCAAAATCCAtaatGTCATTAACATCTCAAGACCTG | 46 | |
BIP | TTAGTGGAGAAAAGCTGTTGAACTCtataACAGCAGAGACAACTCGACG | 49 | |
LB | AAATCTATCAATGCCAGGAGCAA | 23 | |
Ae-primers | F3 | AATCTTTGAACGCACCTTG | 19 |
B3 | GACAGTTAGACAGCAGAGA | 19 | |
FIP | ACCCCCAAAATCCAATACCTATCAAtaatGAGCATGCCTGTTTGAGT | 47 | |
BIP | GTGGAGAAAAAGCCATTTGAACTCCtataAACTAGCATTGCTCCTGG | 47 | |
LF | TCAGACAGGTCTTGAGACTTTAATG | 25 | |
Af-primers | F3 | TGCCTGTTTGAGTGTCATT | 19 |
B3 | GGACATGGATTAGACAGCA | 19 | |
FIP | GCTATACAAGCCCTGCAACCtaatAACATCTCAATACCTGTCTGC | 45 | |
BIP | AGAAAGCTCATTGAACTCCATTGGtataAACTTGGACATTGTTCCTGG | 48 | |
LF | CCCAATTTCCAATACCCATCAA | 22 | |
Apa-primers | F3 | CATGCCTGTTTGAGTGTC | 18 |
B3 | GTCAAGTGGGTCAGACAG | 18 | |
FIP | GAAACAGCCTGCAACTCCCAtaatATTAACACCTCAAGACCTGTC | 45 | |
BIP | TTAGTGGAGAAAAGCTGTTGAACTCtataGCAGAGACCACTTGATGTT | 48 | |
LB | GATAAAATCTATCAATGCCAGGAGC | 25 | |
Aph-primers | F3 | GCCTTGCTCTCTTTGAATGT | 20 |
B3 | GATATGCTTAAGTTCAGCGG | 20 | |
FIP | AGTGATATTGCTCCTGGCATTGtaatGAGAAAAGCCATTGAACTCC | 46 | |
BIP | TGCTGTCTAACTGTGACTGTCTtataTAGTCCTACCTGATTTGAGGT | 47 | |
LB | TGGATGGGGACAACTTGACC | 20 | |
Ar-primers | F3 | TGCCTGTTTGAGTGTCATT | 19 |
B3 | AGTTGGTCAAGTTGTCCAT | 19 | |
FIP | CATTCAAGGAGAGCAAGCTATTTGAtaatGTCTGCTTTTGATAGGTTTCG | 50 | |
BIP | GGTGTGATAAAATGGTATCAATGCCtataCTACAGACAGTTAGCTGAGA | 49 | |
LF | CAACCTGCAACCCCCATAAATC | 22 | |
Asubf-primers | F3 | TGCCTGTTTGAGTGTCATT | 19 |
B3 | GGGTTAGACAGCAGAGAGA | 19 | |
FIP | GCAAGCCATTTAGAAATAGCCTGCtaatGACCTGTCTGCTTTTGGA | 46 | |
BIP | TTAGTGGAAAAAGCCATTGAACTCCtataGCTGATCATTGCTCCTGG | 47 | |
LF | ACCCCCAAATTCCAATACCCA | 21 | |
Asubj-primers | F3 | GCCTTGCTCTCCTTGAATGT | 20 |
B3 | GATATGCTTAAGTTCAGCGG | 20 | |
FIP | GTAGTGATATTGCTCCTGGCATtaatGAAAAGCCATTGAACTCCAT | 46 | |
BIP | TGCTGTCTAACTGTGACTGTCTtataTAGTCCTACCTGATTTGAGGT | 47 | |
LB | GGATGGGGACAACTTGACCAAC | 22 | |
Asubp-primers | F3 | GATTTTTGGGTGTTGCA | 17 |
B3 | AGGTCAAGTTGGTCAAGTT | 19 | |
FIP | CCAATGGAGTTCAATGGCTCTTCtaatGCTTTTTCAGATAGCTTGCT | 47 | |
BIP | TCTATCAATGCCAGGAGCCtataTTACAGACAACTGTGAGA | 41 | |
LB | ATGTTAGTTCTCTCTGCTGTC | 21 | |
Av-primers | F3 | CATCTCAAGACCTGTCTGTT | 20 |
B3 | AGTTGGTCAAGTTGTCCAT | 19 | |
FIP | GAGTTCAATGGCTCTTTCTCCACTAtaatGGATTTTTGGGGGTTTGC | 47 | |
BIP | TCTATCAATGCCCAGGAGCCtataAGACAACTGTTAGCGGTTAG | 44 | |
LF | CATTCAAGGAGAGCAAGCTATCTG | 24 | |
Universal primers | F3 | GCAGAATTCAGTGAATCATC | 20 |
B3 | TTGCTCCTGGCATTGATA | 18 | |
FIP | TGACACTCAAACAGGCATGCtaatAATCTTTGAACGCACCTTG | 43 | |
BIP | CTTGCTCTCCTTGAATGTATTAGTtataGATTTTATCACACCAATGGAGTT | 51 | |
LF | TCCTCGGAATGCCAAGGAG | 19 | |
Ab-PLP | P-GACGTTGCTCCTGGCATTGATATTCCCAATAGGTCCAGAATGTCAGCCGTTCCT CACACCAGACTGCCCTGAGAAATAATCTAAGATTAGACAGCAGAGACAACTC | 106 | |
Ae-PLP | P-CATTGCTCCTGGCATTGATAGATTTTCCCAATAGGTCCAGAATGTCAGCCGTTCCTC ACACCAGACTGCCCTGAGAAATAATCTAAGAGTTAGACAGCAGAGATAACTAG | 110 | |
Af-PLP | P-CCTGCAACCCCCAATTTCCATTCCCAATAGGTCCAGAATGTCAGCCGTTCC TCACACCAGACTGCCCTGAGAAATAATC TAAGAAGAGCAAAGCTATACAAGC | 103 | |
Apa-PLP | P-ACTTGATGTTGCTCCTGGCATTGATTTCCCAATAGGTCCAGAATGTCAGCCGTTCCT CACACCAGACTGCCCTGAGAAATAATCTAAGAGGTTAGACAGCAGAGACC | 107 | |
Aph-PLP | P-TTATTTGAAACAGCCTGCAACCCTTCCCAATAGGTCCAGAATGTCA GCCGTTCCTCACACCAGACTGCCCTGAGAAATAATCTAAGAAAGAGAGCAAGGCTATTT | 105 | |
Ar-PLP | P-TTGTTCATTGCTCCTGGCATTGATATTCCCAATAGGTCCAGAATGTCAGCCGTTCCT CACACCAGACTGCCCTGAGAAATAATCTAAGAACAGTTAGCTGAGAGAACTG | 109 | |
Asubf-PLP | P-TCAAGAGACCAGTCAAAAGTCTCTCATTTCCCAATAGGTCCAGA ATGTCAGCCGTTCCTCACACCAGACTGCCCTGAGAAATA ATCTAAGAGATTCCAATTCAAATCAAT | 110 | |
Asubj-PLP | P-AGTGATATTGCTCCTGGCATTGATATTCCCAATAGGTCCAGAATGTCAGCCGTTCCTCACA CCAGACTGCCCTGAGAAATAATCTAAGAGTTAGACAGCAGAGAGAAGT | 109 | |
Asubp-PLP | P-GTTAGACAGCAGAGAGAACTAACATGGCTTCCCAATAGGTCCAG AATGTCAGCCGTTCCTCACACCAGACTGCCCTGAGAAATA ATCTAAGATTTTACAGACAACTGTGAGA | 112 | |
Av-PLP | P-GTTAGACAGCAGAGAGAACTAACATGGCTTCCCAATAGGTCCAGAATGTCAGCCGTT CCTCACACCAG ACTGCCCTGAGAAATAATCTAAGATTACAGACAACTGTTAGCG | 111 | |
HRCA-primer 1 | GTGAGGAACGGCTGACATTCTG | 22 | |
HRCA-primer 2 | ACCAGACTGCCCTGAGAAATAAT | 23 |
HRCA, hyperbranched rolling circle amplification; PLP, padlock probe; Ab, A. bisporigera; Ae, A. exitialis; Af, A. fuliginea; Apa, A. pallidorosea; Aph, A. phalloides; Ar, A. rimosa; Asubf, A. subfuliginea; Asubj, A. subjunquillea; Ab, A. subpallidorosea; Av, A. virosa. taat, tata were the spacers between F1c and F2, B1c and B2, respectively. P represents phosphorylation and bold represents the 5′ and 3′ arms of the PLP matched to the target region.