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. 2019 Jul 3;10:1523. doi: 10.3389/fmicb.2019.01523

Table 2.

The information of primers and padlocks used for amplification.

Name Type Sequence (5′→3′) Length (bp)
Ab-primers F3 GAGGAGCATGCCTGTTTG 18
B3 GGTCAGACAGTTAGGGTTAG 20
FIP CCTGCAACTCCCAAAATCCAtaatGTCATTAACATCTCAAGACCTG 46
BIP TTAGTGGAGAAAAGCTGTTGAACTCtataACAGCAGAGACAACTCGACG 49
LB AAATCTATCAATGCCAGGAGCAA 23
Ae-primers F3 AATCTTTGAACGCACCTTG 19
B3 GACAGTTAGACAGCAGAGA 19
FIP ACCCCCAAAATCCAATACCTATCAAtaatGAGCATGCCTGTTTGAGT 47
BIP GTGGAGAAAAAGCCATTTGAACTCCtataAACTAGCATTGCTCCTGG 47
LF TCAGACAGGTCTTGAGACTTTAATG 25
Af-primers F3 TGCCTGTTTGAGTGTCATT 19
B3 GGACATGGATTAGACAGCA 19
FIP GCTATACAAGCCCTGCAACCtaatAACATCTCAATACCTGTCTGC 45
BIP AGAAAGCTCATTGAACTCCATTGGtataAACTTGGACATTGTTCCTGG 48
LF CCCAATTTCCAATACCCATCAA 22
Apa-primers F3 CATGCCTGTTTGAGTGTC 18
B3 GTCAAGTGGGTCAGACAG 18
FIP GAAACAGCCTGCAACTCCCAtaatATTAACACCTCAAGACCTGTC 45
BIP TTAGTGGAGAAAAGCTGTTGAACTCtataGCAGAGACCACTTGATGTT 48
LB GATAAAATCTATCAATGCCAGGAGC 25
Aph-primers F3 GCCTTGCTCTCTTTGAATGT 20
B3 GATATGCTTAAGTTCAGCGG 20
FIP AGTGATATTGCTCCTGGCATTGtaatGAGAAAAGCCATTGAACTCC 46
BIP TGCTGTCTAACTGTGACTGTCTtataTAGTCCTACCTGATTTGAGGT 47
LB TGGATGGGGACAACTTGACC 20
Ar-primers F3 TGCCTGTTTGAGTGTCATT 19
B3 AGTTGGTCAAGTTGTCCAT 19
FIP CATTCAAGGAGAGCAAGCTATTTGAtaatGTCTGCTTTTGATAGGTTTCG 50
BIP GGTGTGATAAAATGGTATCAATGCCtataCTACAGACAGTTAGCTGAGA 49
LF CAACCTGCAACCCCCATAAATC 22
Asubf-primers F3 TGCCTGTTTGAGTGTCATT 19
B3 GGGTTAGACAGCAGAGAGA 19
FIP GCAAGCCATTTAGAAATAGCCTGCtaatGACCTGTCTGCTTTTGGA 46
BIP TTAGTGGAAAAAGCCATTGAACTCCtataGCTGATCATTGCTCCTGG 47
LF ACCCCCAAATTCCAATACCCA 21
Asubj-primers F3 GCCTTGCTCTCCTTGAATGT 20
B3 GATATGCTTAAGTTCAGCGG 20
FIP GTAGTGATATTGCTCCTGGCATtaatGAAAAGCCATTGAACTCCAT 46
BIP TGCTGTCTAACTGTGACTGTCTtataTAGTCCTACCTGATTTGAGGT 47
LB GGATGGGGACAACTTGACCAAC 22
Asubp-primers F3 GATTTTTGGGTGTTGCA 17
B3 AGGTCAAGTTGGTCAAGTT 19
FIP CCAATGGAGTTCAATGGCTCTTCtaatGCTTTTTCAGATAGCTTGCT 47
BIP TCTATCAATGCCAGGAGCCtataTTACAGACAACTGTGAGA 41
LB ATGTTAGTTCTCTCTGCTGTC 21
Av-primers F3 CATCTCAAGACCTGTCTGTT 20
B3 AGTTGGTCAAGTTGTCCAT 19
FIP GAGTTCAATGGCTCTTTCTCCACTAtaatGGATTTTTGGGGGTTTGC 47
BIP TCTATCAATGCCCAGGAGCCtataAGACAACTGTTAGCGGTTAG 44
LF CATTCAAGGAGAGCAAGCTATCTG 24
Universal primers F3 GCAGAATTCAGTGAATCATC 20
B3 TTGCTCCTGGCATTGATA 18
FIP TGACACTCAAACAGGCATGCtaatAATCTTTGAACGCACCTTG 43
BIP CTTGCTCTCCTTGAATGTATTAGTtataGATTTTATCACACCAATGGAGTT 51
LF TCCTCGGAATGCCAAGGAG 19
Ab-PLP P-GACGTTGCTCCTGGCATTGATATTCCCAATAGGTCCAGAATGTCAGCCGTTCCT CACACCAGACTGCCCTGAGAAATAATCTAAGATTAGACAGCAGAGACAACTC 106
Ae-PLP P-CATTGCTCCTGGCATTGATAGATTTTCCCAATAGGTCCAGAATGTCAGCCGTTCCTC ACACCAGACTGCCCTGAGAAATAATCTAAGAGTTAGACAGCAGAGATAACTAG 110
Af-PLP P-CCTGCAACCCCCAATTTCCATTCCCAATAGGTCCAGAATGTCAGCCGTTCC TCACACCAGACTGCCCTGAGAAATAATC TAAGAAGAGCAAAGCTATACAAGC 103
Apa-PLP P-ACTTGATGTTGCTCCTGGCATTGATTTCCCAATAGGTCCAGAATGTCAGCCGTTCCT CACACCAGACTGCCCTGAGAAATAATCTAAGAGGTTAGACAGCAGAGACC 107
Aph-PLP P-TTATTTGAAACAGCCTGCAACCCTTCCCAATAGGTCCAGAATGTCA GCCGTTCCTCACACCAGACTGCCCTGAGAAATAATCTAAGAAAGAGAGCAAGGCTATTT 105
Ar-PLP P-TTGTTCATTGCTCCTGGCATTGATATTCCCAATAGGTCCAGAATGTCAGCCGTTCCT CACACCAGACTGCCCTGAGAAATAATCTAAGAACAGTTAGCTGAGAGAACTG 109
Asubf-PLP P-TCAAGAGACCAGTCAAAAGTCTCTCATTTCCCAATAGGTCCAGA ATGTCAGCCGTTCCTCACACCAGACTGCCCTGAGAAATA ATCTAAGAGATTCCAATTCAAATCAAT 110
Asubj-PLP P-AGTGATATTGCTCCTGGCATTGATATTCCCAATAGGTCCAGAATGTCAGCCGTTCCTCACA CCAGACTGCCCTGAGAAATAATCTAAGAGTTAGACAGCAGAGAGAAGT 109
Asubp-PLP P-GTTAGACAGCAGAGAGAACTAACATGGCTTCCCAATAGGTCCAG AATGTCAGCCGTTCCTCACACCAGACTGCCCTGAGAAATA ATCTAAGATTTTACAGACAACTGTGAGA 112
Av-PLP P-GTTAGACAGCAGAGAGAACTAACATGGCTTCCCAATAGGTCCAGAATGTCAGCCGTT CCTCACACCAG ACTGCCCTGAGAAATAATCTAAGATTACAGACAACTGTTAGCG 111
HRCA-primer 1 GTGAGGAACGGCTGACATTCTG 22
HRCA-primer 2 ACCAGACTGCCCTGAGAAATAAT 23

HRCA, hyperbranched rolling circle amplification; PLP, padlock probe; Ab, A. bisporigera; Ae, A. exitialis; Af, A. fuliginea; Apa, A. pallidorosea; Aph, A. phalloides; Ar, A. rimosa; Asubf, A. subfuliginea; Asubj, A. subjunquillea; Ab, A. subpallidorosea; Av, A. virosa. taat, tata were the spacers between F1c and F2, B1c and B2, respectively. P represents phosphorylation and bold represents the 5′ and 3′ arms of the PLP matched to the target region.