Table 4. Epistatic effect of pairwise interacting factors for PCAT1 on the risks of CRC.
Interacted pairwise SNPs | Comparison | Subset | CRC vs CON | Colon cancer vs CON | Rectal cancer vs CON | |||
---|---|---|---|---|---|---|---|---|
P value | OR (95% CI) | P value | OR (95% CI) | P value | OR (95% CI) | |||
rs1902432 interacted with rs2632159 | rs1902432 CC vs TT+TC | rs2632159 CC | NA | NA | NA | NA | NA | NA |
rs2632159 TT+TC | 0.196 | 0.78 (0.54–1.14) | 0.025 | 0.57 (0.35–0.93) | 0.871 | 1.04 (0.67–1.62) | ||
rs2632159 CC vs TT+TC | rs1902432 CC | NA | NA | NA | NA | NA | NA | |
rs1902432 TT+TC | 0.065 | 2.02 (0.96–4.27) | 0.603 | 1.29 (0.49–3.37) | 0.011 | 2.93 (1.28–6.70) | ||
rs4573233 interacted with rs2632159 | rs4573233 AA+GA vs GG | rs2632159 CC | 0.547 | 0.85 (0.51–1.44) | NA | NA | NA | NA |
rs2632159 TT+TC | 0.788 | 1.06 (0.70–1.61) | 0.441 | 1.15 (0.81–1.64) | 0.820 | 0.96 (0.67–1.40) | ||
rs2632159 CC vs TT+TC | rs4573233 AA+GA | 0.406 | 1.23 (0.76–1.98) | 0.200 | 1.45 (0.82–2.57) | 0.991 | 1.00 (0.55–1.83) | |
rs4573233 GG | 0.063 | 1.55 (0.98–2.45) | 0.101 | 1.57 (0.92–2.69) | 0.141 | 1.52 (0.87–2.66) | ||
rs710885 interacted with rs2632159 | rs710885 GG+TG vs TT | rs2632159 CC | 0.266 | 1.34 (0.80–2.23) | 0.310 | 0.16 (0.01–5.49) | 0.195 | 0.11 (0.00–3.09) |
rs2632159 TT+TC | 0.570 | 0.58 (0.09–3.77) | 0.164 | 1.45 (0.86–2.44) | 0.310 | 1.34 (0.76–2.34) | ||
rs2632159 CC vs TT+TC | rs710885 GG+TG | 0.189 | 3.84 (0.52–28.60) | 0.516 | 1.95 (0.26–14.50) | NA | NA | |
rs710885 TT | 0.321 | 1.20 (0.84–1.72) | 0.109 | 1.40 (0.93–2.13) | 0.959 | 0.99 (0.62–1.56) | ||
rs785005 interacted with rs2632159 | rs785005 AA+GA vs GG | rs2632159 CC | 0.672 | 0.89 (0.53–1.51) | NA | NA | NA | NA |
rs2632159 TT+TC | 0.643 | 1.09 (0.76–1.55) | 0.496 | 1.13 (0.80–1.59) | 0.425 | 0.87 (0.61–1.23) | ||
rs2632159 CC vs TT+TC | rs785005 AA+GA | 0.390 | 1.22 (0.77–1.94) | 0.388 | 1.27 (0.74–2.16) | 0.590 | 1.17 (0.66–2.10) | |
rs785005 GG | 0.051 | 1.55 (1.00–2.40) | 0.008 | 2.01 (1.21–3.28) | 0.540 | 1.18 (0.70–1.98) |
Terms in bold represent significant results (P<0.05). All tests were adjusted by age and gender. Statistically significant associations were highlighted in bold (P<0.05). Abbreviations: CON, controls; CRC, colorectal cancer.