Table 2.
Recovery of proteins that constitute the NM protein corona—both the fraction in solution and the fraction remaining on the NM post extraction.
Experimental Component | TiO2 | TiO2-PVP | TiO2-Dispex | PS | PS-COOH | |
---|---|---|---|---|---|---|
On-particle digest | Summed MS signal intensity | 1.0 × 1011 | 1.1 × 1010 | 7.7 × 1010 | 8.9 × 109 | 3.6 × 1010 |
High confidence proteins | 80 | 81 | 83 | 77 | 86 | |
Remaining in-gel | Summed MS signal intensity | 5.1 × 107 | 3.3 × 106 | 1.2 × 108 | 1.4 × 107 | 2.6 × 108 |
% summed MS signal remaining | 0.05% | 0.03% | 0.16% | 0.15% | 0.73% | |
High confidence proteins | 0 | 0 | 0 | 2 | 3 | |
Median remaining on particle * | 0.05% | 0.10% | 0.09% | 0.15% | 0.80% |
* calculated as the median of individual protein abundance ratios using peaks of the top 3 peptide intensities (Remaining on-particle/On-particle digestion).