Table 3.

Number of significant SNPs per environment, per technology and for the combined technologies

	Flowering Time					Plant Height					Grain Yield
Env.	Herit.	50 K	600 K	GBS	ALL	Herit.	50 K	600 K	GBS	ALL	Herit.	50 K	600 K	GBS	ALL
Cam12R	0.40	0	3	1	4	0.57	23	209	88	289	0.37	21	286	102	381
Cam12W	0.60	1	18	13	31	0.39	22	270	72	339	0.54	41	525	167	684
Cam13R	0.46	0	9	7	16	0.21	0	2	3	5	0.19	0	1	3	4
Cra12R	0.69	1	40	18	59	0.32	0	6	3	9	0.25	3	57	45	103
Cra12W	0.72	3	25	19	43	0.19	10	69	16	83	0.53	12	98	53	150
Deb12R	0.63	1	14	16	30	0.33	0	1	0	1	0.57	2	14	0	16
Deb12W	0.71	0	25	38	61	0.37	0	6	7	7	0.47	0	6	2	8
Deb13R	0.59	1	17	5	23	0.08	0	33	9	42	0.37	1	22	15	37
Gai12R	0.64	8	80	24	104	0.18	1	47	41	89	0.31	0	23	8	31
Gai12W	0.66	5	42	15	59	0.46	0	1	3	4	0.58	3	71	14	85
Gai13R	0.62	0	24	8	31	0.66	0	6	6	11	0.63	0	4	5	9
Gai13W	0.73	1	45	9	54	0.33	0	1	3	4	0.76	2	7	1	9
Kar12R	0.72	4	30	21	52	0.30	0	4	3	7	0.71	0	5	6	11
Kar12W	0.77	8	60	10	73	0.23	1	10	4	14	0.53	2	19	11	29
Kar13R	0.68	3	65	11	77	0.31	0	4	2	6	0.75	4	37	24	62
Kar13W	0.73	0	17	12	29	0.26	0	2	7	9	0.67	4	12	6	19
Mur13R	0.83	3	48	19	68	0.32	7	61	7	68	0.84	14	90	28	116
Mur13W	0.76	0	11	8	19	0.32	3	4	2	9	0.74	10	80	25	104
Ner12R	0.72	7	23	18	45	0.34	0	7	3	10	0.54	1	10	6	16
Ner12W	0.81	1	80	30	107	0.24	0	2	2	4	0.59	1	8	6	15
Ner13R	0.76	3	60	26	88	0.26	1	25	13	38	0.32	0	13	7	20
Ner13W	0.81	2	23	17	42	0.20	0	8	5	13	0.73	2	28	4	32
Average	0.68	2.4	34.5	15.7	50.7	0.31	3.1	35.4	13.6	48.2	0.55	5.6	64.4	24.5	88.2
Median	0.71	1	25	15.5	47.5	0.32	0	6	4.5	9.5	0.56	2	20.5	7.5	30
SD	0.11	2.6	22.7	8.7	27.7	0.13	6.8	69.6	23.2	90.2	0.18	9.6	120.1	39.5	156.8

The average, median and standard deviation (SD) per environment are calculated for each trait (male Flowering Time, Plant Height, Grain Yield). “Herit.”: narrow sense heritability. “Env.”: Environment