Locus | Primer sequences (5′–3′) | Repeat motif | Product size (bp) |
---|---|---|---|
Gp_cp_2 | F: ACATTGATTTCTAAAAGAGAGGAGTCA | (A)11 | 211 |
R: TCAGTGTCAGAAATTTGGCTGA | |||
Gp_cp_3 | F: TGATGAGCTACTCTACGTGCT | (T)13 | 369 |
R: ATCTGCCATTGTACCCGCAA | |||
Gp_cp_4 | F: ATAGATTCCGAGCGGCTGTG | (T)18 | 292 |
R: ACCGCTGAGTTATATCCCTTTCC | |||
Gp_cp_5 | F: GCGATCGTACCTTCATCGGA | (T)20 | 230 |
R: TCCTTTTTCAATATCGTTCCCTGG | |||
Gp_cp_9 | F: ATTTCTCGCCAAGCTGTCCA | (AT)10 | 332 |
R: CGAGCAATGCCATCTCCTACT | |||
Gp_cp_10 | F: CGAACCCGCATCGTTAGCTT | (A)15 | 280 |
R: GGTTGTTCACCTGAAATTAAGAGGA | |||
Gp_cp_15 | F: TCAAGCAAAGGTAGATGGTGAG | (A)12 | 257 |
R: TCTCAACCTTCATGTGGGAG | |||
Gp_cp_16 | F: ATGCTCTTTCGCAACGTTCG | (A)12 | 201 |
R: TGAACACAAAGAAAGGTAAGGTCT | |||
Gp_cp_18 | F: TCCGCTCAATTCCGTTACTC | (T)12 | 145 |
R: TCCATGATTGATTTTCCCTTCGT | |||
Gp_cp_19 | F: TCTTGCAAAATCCGGACCG | (A)11 | 201 |
R: TGAACCAAGTCAGTTCGCTTG | |||
Gp_cp_20 | F: CGAAAACCGTCGGGAAACAT | (A)11 | 260 |
R: GCTTCTTCCTTCCCGCCAT | |||
Gp_cp_21 | F: GGCTCGCGGGTATGTTAACT | (A)11 | 190 |
R: TCGGGCAATTTTGTCATGTACC | |||
Gp_cp_22 | F: AGGGGCAGAATCTAGGGTT | (A)11 | 194 |
R: CCGCTATTTTCCACGTTGAGC | |||
Gp_cp_23 | F: ATCCGCCTTGATTCCCGTTT | (A)11 | 263 |
R: ACAGGCGCTGTGGAAAGAT | |||
Gp_cp_24 | F: TCTCTTTTGCGTCCTTCCCC | (T)11 | 231 |
R: AAGAATTAGTTCGCCATGGGT | |||
Gp_cp_25 | F: TCCTTCGGGATTAATTCTTCATTCT | (T)11 | 264 |
R: AATCCTGAGCAGCCAAACC | |||
Gp_cp_26 | F: TTGTAGCTCTACGTGGCAC | (AT)11 | 263 |
R: AGGCATAAACAAAAACAGGGCT | |||
Gp_cp_27 | F: CGGGGGAATGATACCTGTCG | (T)10 | 138 |
R: ACGGAGACTTGATATTGATGCTC | |||
Gp_cp_28 | F: TCGTGAATTCGTTGGACAG | (TA)10 | 213 |
R: TCCATCTGACTCACTCGACT | |||
Gp_cp_29 | F: GAGCTTACTTGGGTACTGAGC | (A)10 | 126 |
R: CATCCGGCTCGAGCAATAGT | |||
Gp_cp_30 | F: TGAGTATCCGTTTCCTTTCTTTTGC | (A)10 | 201 |
R: TAAGTTTTCCCTTACTATAGTGTGTGT | |||
Gp_cp_31 | F: CGGGAAGAGTAGTATGAAGCTC | (A)10 | 233 |
R: GCATATGTGCGATGAATAGACTCC | |||
Gp_cp_32 | F: CCGAGAACGAACCGAATGGA | (A)10 | 157 |
R: GGGATTGACTGTTGGATTGGC | |||
Gp_cp_33 | F: ATTAGCGGGGAGTTCCATCC | (A)10 | 226 |
R: CGGACTTGTGATTCGTTTGATCT | |||
Gp_cp_34 | F: ACGCGGCGATCAATTGGATA | (A)10 | 143 |
R: CCTACAGAGCGTGATCCTGC | |||
Gp_cp_36 | F: TCATTTTTACCCAGGAATAGAAACAT | (A)10 | 156 |
R: GATGGCTTCATTTTATTCATAGTTTGT | |||
Gp_cp_37 | F: ACCCAAAAAGAGGAGACAAGC | (A)10 | 165 |
R: GAATGACTTCGGGGTGGGAG | |||
Gp_cp_38 | F: ACTTGGACGAACTCCCTATTGA | (AT)9 | 221 |
R: CAGCCGGGATAGCTCAGTTG | |||
Gp_cp_39 | F: TCTTATGTTCTTAGTAACACGCCT | (A)9 | 125 |
R: TGGAGTAGGAGGAAAATCCGT | |||
Gp_cp_40 | F: ATGTCTCGTTATCGCGGACC | (A)9 | 248 |
R: TGACCTGTTGATCCCTTGGC | |||
Gp_cp_41 | F: CTGCACATCTGTCCCTCTGT | (T)9 | 162 |
R: TGCTTTCATCCTCCCGCAAT | |||
Gp_cp_42 | F: TGCGATCGTAAGGAAATCCA | (A)9 | 211 |
R: TTCTCCCCTGAAGCCATTGG | |||
Gp_cp_43 | F: GGTTGATGGCTCTGGTCTTGA | (A)9 | 186 |
R: TGAATCCTTGTTGCTCGGCT | |||
Gp_cp_44 | F: CCATTCGATCCCTATCCGGTC | (T)9 | 224 |
R: CATCAACCACTCGGCCATCT | |||
Gp_cp_45 | F: AGTGAGGTAGATTACGCCTAATCT | (A)9 | 222 |
R: AGCCCAGTGTTCATTTTGAATATT | |||
Gp_cp_46 | F: GCGAGTCAAGCCGAAGTACA | (A)9 | 132 |
R: AATTTTTCGTTTCCTTCGTACTACT | |||
Gp_cp_47 | F: GAAGCAACCGCCAATTCTTCA | (T)9 | 190 |
R: TGTTCGGGTGAGAAAGGTGT | |||
Gp_cp_48 | F: TCTCTTACATATCTCTGGAAAAAGGA | (T)9 | 228 |
R: TGCTGCTCTGTCCCAACTAT | |||
Gp_cp_49 | F: AGCGAAGAATCCCTTGTCCTG | (A)9 | 171 |
R: ATCTGGGCCCTCCGTCTAAT | |||
Gp_cp_50 | F: CAGATACTGGCCGGGCTAGA | (A)9 | 140 |
R: CGCTCAGCCATCTCTCCTAG | |||
Gp_cp_51 | F: CGCCATCTTGGATGGAATGG | (T)9 | 233 |
R: TGTGGCGGGTATAGTTTAGTGG | |||
Gp_cp_52 | F: CGGCTTTTAAGTGCGACTATGG | (A)9 | 298 |
R: TGACTTAATCACCCGCACTC | |||
Gp_cp_53 | F: GGCACGAGAACTTGAAGATCG | (A)9 | 164 |
R: ATTGATTCATCGACCCGCGG | |||
Gp_cp_54 | F: TGCATAAGAATGAGCCAACTTGA | (T)9 | 187 |
R: TCATACGGCTTAAACAAGAACAC | |||
Gp_cp_55 | F: CAGGCATTTACTTTTTGTTTTGGAGT | (T)9 | 134 |
R: TTTGGGTGGAATGGGGATTG | |||
Gp_cp_56 | F: ATATTCCGCAAGAATTTTGGGTT | (T)9 | 202 |
R: TGCATTTGTCAACTTGTTTATCGAGA | |||
Gp_cp_57 | F: CGCACGGCTCCTAAGTGAT | (T)9 | 257 |
R: ACCCTAAGATGAGCATCGC | |||
Gp_cp_58 | F: TGTGTATTTGGCTTTGAAACGA | (T)9 | 176 |
R: TGTCTTTGTTTGCTCAATTTTGC | |||
Gp_cp_59 | F: TATTGGACCAGCGGTAGTGG | (T)9 | 144 |
R: ATAAGCAGTCCAAGGGGAGC | |||
Gp_cp_60 | F: ACGATTATTCAGATTGAGCTCCGA | (T)9 | 201 |
R: CCCCATTTACCTGTATGCTATACT | |||
Gp_cp_61 | F: GTTCAGCCAATAGGGGAGGG | (T)9 | 159 |
R: TAAGTCCCAGGTCCCGCAT | |||
Gp_cp_62 | F: TGTCTACGTGCATAAACTCTTTTC | (T)9 | 209 |
R: ACCACGCTCATCTCATGTAC | |||
Gp_cp_63 | F: CCACCTATGCCCATACGGTC | (T)9 | 127 |
R: TCGATTGACCTGAGGACCTT | |||
Gp_cp_64 | F: GGGTACCGGGTTCTATTGAAT | (A)8 | 149 |
R: TCGATCTATGCCGCCTTACT | |||
Gp_cp_70 | F: TCGAGCCGTATGAAGATAAACCT | (G)11 | 137 |
R: GCTCTTCCTTCGCTTCGAG |
Optimal annealing temperature was 55°C for all loci.