Table 2 ∣.
Higher-confidence genes from the photosynthesis screen with no previously known role in photosynthesis.
| Gene | Defline/description in Phytozome |
PredAlgo | Alleles in two replicates |
At homolog | ||
|---|---|---|---|---|---|---|
| + | − | FDR | ||||
| Cre01.g008550 | Serine/threonine kinase-related | O | 2 | 0 | 0.260 | AT1G73450.1 |
| 1 | 1 | 1.000 | ||||
| Cre01.g014000 | - | C | 3 | 0 | 0.021 | - |
| 3 | 0 | 0.018 | ||||
| Cre01.g037800 (TRX21) | ATP binding protein; thioredoxin domain | O | 3 | 3 | 0.260 | AT2G18990.1 (TXND9) |
| 1 | 5 | 1.000 | ||||
| Cre02.g073900 | All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase | C | 3 | 1 | 0.070 | AT4G32810.1 (ATCCD8, CCD8, MAX4) |
| 3 | 1 | 0.056 | ||||
| Cre02.g111550 | Serine/threonine kinase-related | SP | 10 | 8 | < 10−6 | AT4G24480.1 |
| 6 | 12 | 0.015 | ||||
| Cre03.g185200 (CPL3, MPA6) | Metallophosphoesterase/metallodependent phosphatase | C | 3 | 4 | 0.260 | AT1G07010.1 |
| 3 | 4 | 0.239 | ||||
| Cre06.g259100 | - | C | 1 | 4 | 1.000 | - |
| 3 | 2 | 0.117 | ||||
| Cre06.g281800 | Domain of unknown function (DUF1995) | C | 3 | 0 | 0.021 | - |
| 3 | 0 | 0.018 | ||||
| Cre07.g316050 (CDJ2) | Chloroplast DnaJ-like protein | M | 2 | 0 | 0.260 | AT5G59610.1 |
| 1 | 1 | 1.000 | ||||
| Cre07.g341850 (EIF2, INFB) | Translation initiation factor IF-2, chloroplastic | C | 2 | 0 | 0.260 | AT1G17220.1 (FUG1) |
| 2 | 0 | 0.239 | ||||
| Cre08.g358350 (TDA1, OPR34) | Fast leu-rich domain-containinga | C | 3 | 2 | 0.152 | - |
| 3 | 2 | 0.117 | ||||
| Cre09.g396250 (VTE5) | Phosphatidate cytidylyltransferase | SP | 2 | 0 | 0.260 | AT5G04490.1 (VTE5) |
| 1 | 1 | 1.000 | ||||
| Cre10.g429650 | Alpha/beta hydrolase family (Abhydrolase_5) | O | 2 | 0 | 0.260 | - |
| 1 | 1 | 1.000 | ||||
| Cre10.g448950 | Nocturnin | C | 1 | 1 | 1.000 | AT3G58560.1 |
| 2 | 0 | 0.239 | ||||
| Cre11.g467712 | Structural maintenance of chromosomes smc family member; starch-binding domain | M | 7 | 7 | 0.0003 | AT5G05180.1 |
| 7 | 7 | 0.0003 | ||||
| Cre12.g542569 | Ionotropic glutamate receptor | O | 0 | 2 | 1.000 | AT1G05200.1 (ATGLR3.4, GLR3.4, GLUR3) |
| 2 | 0 | 0.239 | ||||
| Cre13.g566400 (OPR55) | Fast leu-rich domain-containinga | M | 4 | 2 | 0.018 | - |
| 4 | 2 | 0.015 | ||||
| Cre13.g574000 (GEF1, CLV1) | Voltage-gated chloride channel | O | 1 | 11 | 1.000 | AT5G26240.1 (ATCLC-D, CLC-D) |
| 4 | 8 | 0.144 | ||||
| Cre13.g586750 | Transportin 3 and importin | O | 3 | 4 | 0.260 | AT5G62600.1 |
| 2 | 5 | 1.000 | ||||
| Cre16.g658950 | - | C | 2 | 2 | 0.909 | - |
| 3 | 1 | 0.056 | ||||
| Cre50.g761497 | Magnesium transporter mrs2 homolog, mitochondrial | M | 2 | 0 | 0.260 | AT5G22830.1 (ATMGT10, GMN10, MGT10, MRS2-11) |
| 2 | 0 | 0.239 | ||||
a
The annotation of “fast leu-rich domain-containing” cannot be confirmed by BLASTp analysis at NCBI57.