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. 2019 Jul 17;9:10389. doi: 10.1038/s41598-019-46863-9

Table 2.

Antimicrobial activity screening of endophytic bacteria against phytopathogen and their identification based on 16S rRNA gene sequencing analysis.

Strain Number GenBank accession number Closest species in 16S rRNA gene sequences database samilarity% Active part Pathogenic bacteria Pathogenic fungi
Pectobacterium carotovorum subsp. actinidiae Athelia rolfsii Myrothecium roridum
228 BL-HTie-5 MK389455 Burkholderia gladioli 98.93 supernatant +++ +++
sediment +++ +++
214 NA-HTong-6 MK389454 Bacillus albus 98.88 supernatant + ++
sediment ++ ++
207 NA-HTong-7 MK389456 Bacillus megaterium 99.12 supernatant ++ +++ +++
sediment +++ +++
65 CM-YTong-3 MK389446 Paraburkholderia kirstenboschensis 98.87 supernatant + +
sediment
166 YIM-YTie-3 MK389426 Kluyvera cryocrescens 98.43 supernatant +
sediment
70 SP-YTie-7 MK389432 Rouxiella badensis 99.8 supernatant ++ ++
sediment + +
97 YIM-YTie-9 MK389435 Microbacterium testaceum 98.78 supernatant ++ ++
sediment +
13 SP-YTie-14 MK389441 Brevibacterium frigoritolerans 99.93 supernatant + +
sediment
124 YIM-YTie-17 MK389449 Burkholderia vietnamiensis 97.48 supernatant
sediment ++
107 BL-YTie-20 MK389452 Pseudomonas hunanensis 99.79 supernatant +
sediment
236 BL-YTie-23 MK389458 Pseudomonas parafulva 99.29 supernatant +
sediment
194 HV-YTie-24 MK389459 Paraburkholderia insulsa 99.02 supernatant +
sediment +
202 RH-YTie-25 MK389460 Paraburkholderia tropica 99.04 supernatant
sediment + +
135 CM-YTie-26 MK389461 Dyella jiangningensis 99.64 supernatant ++ +
sediment ++

− indicates no activity; +, indicates positive activity, diameter of zones of inhibition less than 10 mm; ++, indicates medium activity, diameter of zones of inhibition between 10 and 20 mm; +++, indicates strong activity, diameter of zones of inhibition greater than 20 mm.