Table 6.
Hormone-related genes that were differentially expressed during cold treatment
| Gene ID | Fold change | Annotation | Gene ID | Fold change | Annotation |
|---|---|---|---|---|---|
| ABA | |||||
| c52591_g1 | 3.93 | 9-cis-epoxycarotenoid dioxygenase NCED3 | c1769_g1 | − 1.53 | Regulatory components of ABA receptor 3 |
| c62542_g3 | − 1.6 | xanthoxin dehydrogenase-like | c62935_g2 | −1.53 | probable protein phosphatase 2C |
| c48091_g1 | − 3.4 | ABA 8′-hydroxylase | c58656_g3 | 1.45 | SNF1-related protein kinase |
| c60506_g1 | 1.69 | abscisic acid receptor PYL4-like | c56328_g1 | 2.75 | SNF1-related protein kinase regulatory subunit beta-1 |
| c7217_g1 | 1.05 | Abscisic acid receptor PYR1 | c63212_g3 | 1.34 | SNF1-related protein kinase catalytic subunit alpha KIN10 |
| c38913_g1 | 1.77 | Regulatory components of ABA receptor 14 | c61792_g2 | −3.56 | ABA 8′-hydroxylase 1 |
| Ethylene | |||||
| c50527_g2 | −1.52 | ethylene receptor 2-like | c53991_g2 | −1.88 | protein ETHYLENE INSENSITIVE 3-like |
| c62228_g1 | −2.31 | EIN3-binding F-box protein 1-like | c47465_g1 | −4.65 | ethylene-responsive transcription factor 1B-like |
| c31693_g1 | −4 | EIN3-binding F-box protein | c57546_g1 | 2.78 | ETHYLENE INSENSITIVE 2 protein |
| c62228_g4 | −2.75 | EIN3-binding F-box protein 1-like | c57132_g1 | −1.95 | ACC oxidase |
| c53991_g4 | −2.29 | ETHYLENE INSENSITIVE 3 protein | c53991_g1 | −1.93 | protein ETHYLENE INSENSITIVE 3-like |
| JA | |||||
| c43502_g1 | 7.48 | 4-coumarate--CoA ligase-like 8 | c60616_g1 | 1.89 | long chain acyl-CoA synthetase 1 |
| c60697_g4 | 2.64 | Jasmonate O-methyltransferase | c59607_g4 | 1.35 | Jasmonate ZIM domain-containing protein 2 |
| c41372_g1 | 6.09 | 4-coumarate--CoA ligase-like 8 | c57501_g1 | 2.74 | Jasmonate ZIM domain-containing protein 10 |
| c56341_g2 | 1.25 | Transcription factor MYC | c42250_g1 | 1.91 | transcription factor MYC |
| Auxin | |||||
| c38939_g1 | 4.68 | Auxin transporter-like protein 5 | c35279_g1 | 1.28 | auxin response factor 9-like |
| c3589_g1 | 1.63 | auxin-responsive protein IAA30-like | c57906_g5 | 1.67 | putative auxin response factor 3 |
| c47402_g1 | 1.42 | auxin-induced protein 22D | c46512_g1 | 1.84 | auxin-responsive factor AUX/IAA-related |
| c48916_g1 | 4.04 | auxin-induced protein IAA6-like | c35732_g2 | 4.19 | Auxin-responsive GH3-like protein 9 |
| c24135_g1 | 1.43 | Auxin-induced protein 22B | c35732_g1 | 4.04 | Auxin-responsive GH3-like protein 11 |
| c48916_g2 | 2.90 | Auxin-induced protein AUX22 | c71925_g1 | 4.17 | Auxin-induced protein 15A |
| c53435_g1 | 1.48 | auxin-responsive protein IAA30-like | c56489_g1 | 3.11 | Auxin responsive protein |
| c57906_g6 | 2.51 | Auxin response factor 3 | c33246_g1 | −2.84 | auxin-induced protein 6B-like |
| GA | |||||
| c47742_g1 | −2.03 | Gibberellin receptor GID1C | c1979_g1 | 2.92 | gibberellin-regulated protein 9 |
| c50177_g1 | 2.37 | GRAS family transcription factor | |||
| Salicylic acid | |||||
| c60466_g3 | −1.35 | NPR1–1 protein | c60863_g3 | −3.58 | pathogenesis-related protein 1 |
| c1824_g2 | −3.68 | Pathogenesis-related protein PR-1 | c59609_g1 | −3.15 | pathogenesis-related protein PRB1–3-like |