Table 2.
Putative Androgen Responsive Elements in the promoter region of human SP-D genea.
| Sr. | Start | End | Anchor | Core Sim. | Matrix Sim. | Strand | Sequence | |
|---|---|---|---|---|---|---|---|---|
| 1 | ARE | 904 | 922 | 913 | 0.898 | 0.938 | + | ataagacctcctGTGCtcc |
| 2 | ARE | 2,339 | 2,357 | 2,348 | 1 | 0.895 | – | gaaatgcttaaaGTTCtaa |
| 3 | ARE | 3,787 | 3,805 | 3,796 | 1 | 0.912 | – | ccaaagctttgtGTTCcct |
| 4 | ARE | 5,430 | 5,448 | 5,439 | 0.878 | 0.901 | + | ttttttctttcaGTACttt |
| 5 | ARE | 5,851 | 5,869 | 5,860 | 1 | 0.912 | + | ttttttctttttGTTCctc |
| 6 | ARE | 7,481 | 7,499 | 7,490 | 1 | 0.941 | + | gccataccttatGTTCtgc |
| 7 | ARE | 7,589 | 7,607 | 7,598 | 1 | 0.8 | + | caggtgctatcTGTTgttg |
| 8 | ARE | 8,303 | 8,321 | 8,312 | 0.875 | 0.945 | – | gctgcacccactGTCCtgc |
| 9 | ARE | 8,366 | 8,384 | 8,375 | 0.869 | 0.896 | – | ccctgaccccttGTGCtct |
| 10 | ARE | 9,883 | 9,901 | 9,892 | 0.959 | 0.907 | – | ttctctctggctGTCCtta |
a
MatInspector Genomatix v3.4 Software was used for in silico analysis of human SP-D gene promoter region −10,000 bp upstream to +1,000 bp downstream from the TSS site.