Table 2.
Summary of small RNAs (sRNAs) identified by high‐throughput sequencing that are predicted to bind the FRIGIDA‐like protein 3 (FRL3) mRNA of tomato plants.
| vd‐sRNA | Position | vd‐sRNA sequence | PSTVd‐M (%)* | PSTVd‐I (%)* |
|---|---|---|---|---|
| 21 | 346‐07 | CGCAGTTGGTTCCTCGGAACT | 1.86 | 0.87 |
| 22 | 345‐07 | CCGCAGTTGGTTCCTCGGAACT | 0.25 | 0.20 |
| 22 | 346‐08 | CGCAGTTGGTTCCTCGGAACTA | 0.43 | 0.24 |
| 23 | 344‐07 | ACCGCAGTTGGTTCCTCGGAACT | 3.05 | 3.03 |
| 23 | 346‐09 | CGCAGTTGGTTCCTCGGAACTAA | 0.79 | 0.65 |
| 24 | 343‐07 | AACCGCAGTTGGTTCCTCGGAACT | 0.38 | 0.55 |
| 24 | 346‐10 | CGCAGTTGGTTCCTCGGAACTAAA | 0.22 | 0.20 |
| Total | 1.06 | 0.68 |
PSTVd‐M, potato spindle tuber viroid‐Mild; PSTVd‐I, potato spindle tuber viroid‐Intermediate; vd‐sRNA, viroid‐derived small RNA.
*(+) sRNA was used for the calculation.