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. 2018 Feb 1;19(7):1719–1732. doi: 10.1111/mpp.12654

Table 1.

The subset of 16 candidate genes prioritized from the 106 genes identified in the genome‐wide association (GWA) mapping.

Gene Description P value of most significant SNP * Annotated role in defence Expression levels in biotic stress SALK line Location of insertion
AT1G06990 Encodes a GDSL‐like lipase superfamily protein 1.79E‐04 Yes No SALK_097961C Exon
AT1G58160 Encodes a mannose‐binding lectin superfamily protein (JAX1) 5.44E‐05 Yes No Pseudogene in Col‐0
AT1G79310 Encodes a putative metacaspase (MC7) 2.49E‐04 Yes No SALK_148148C Promoter
AT1G79320 Encodes a putative metacaspase (MC6) 2.49E‐04 Yes No Not available §
AT2G43860 Encodes a pectin lyase‐like superfamily protein 2.346E‐05 Yes No SALK_098125C Promoter
AT2G44240 Encodes a plant protein of unknown function (DUF239) 1.71E‐05 No Yes SALK_075708 Exon
AT2G44270 Encodes ROL5 (repressor of lxr1) 1.71E‐05 No Yes SALK_078566C Exon
AT3G10195 Encodes a defensin‐like (DEFL) family protein 6.29E‐04 Yes No SALK_017693C Promoter
AT3G23280 Encodes a ubiquitin ligase (XBAT35) 6.57E‐05 No Yes SALK_104813C Exon
AT3G25180 Encodes a cytochrome P450 monooxygenase (CYP82G1) 8.94E‐07 Yes Yes CS436097 Intron
AT3G52600 Encodes a cell wall invertase 2 (CWINV2) 3.34E‐05 Yes Yes Not available §
AT3G57380 Encodes a glycosyltransferase family 61 protein 2.49E‐04 Yes Yes Not available
AT4G02330 Encodes a pectin methylesterase (PME41) 4.88E‐06 Yes Yes Not available §
AT5G13190 Encodes a plasma membrane localized LITAF domain protein (GILP) 8.40E‐05 Yes Yes Not available
AT5G37500 Encodes a guard cell outward potassium channel GORK 1.73E‐04 No Yes SALK_144737C Exon
AT5G37610 Encodes a eukaryotic porin family protein 1.90E‐05 No Yes Not available §

*P value of most significant single nucleotide polymorphism (SNP) from the linear model.

†Gene annotations from TAIR 10 and gene ontology (GO) terms.

‡mRNA expression levels in various biotic stresses from public databases.

§Not available at the time of the experiment.