Table 1.
Currently sequenced Pantoea ananatis genomes.
| Strain | Assembly | Genome size (Mb) | G + C (%) | Status | No. CDSs | Interest | Source | Reference |
|---|---|---|---|---|---|---|---|---|
| P. ananatis AJ13355 | GCA_000270125.2 | 4.88 | 53.7 | Complete | 4223 | Biotechnological | Soil | Hara et al. ( 2012) |
| P. ananatis AMG521 | GCA_001465955.1 | 4.88 | 53.1 | Draft | 4315 | Plant growth promoter | Rice paddy | Megías et al. (2016) |
| P. ananatis B1‐9 | GCA_000285975.1 | 5.12 | 53.5 | Draft | 4566 | Plant growth promoter | Rhizosphere of onion root | Kim et al. ( 2012) |
| P. ananatis BD442 | GCA_000709995.1 | 4.8 | 53.6 | Draft | 4330 | Plant pathogen | Onion seed | Weller‐Stuart et al. ( 2014) |
| P. ananatis BRT175 | GCA_000475035.1 | 4.85 | 53.7 | Draft | 4336 | Antibiosis | Strawberry | Smith et al. ( 2013) |
| P. ananatis CFH 7‐1 | GCA_001187705.1 | 4.6 | 53.1 | Draft | 4094 | Plant pathogen | Cotton boll | Medrano and Bell ( 2015) |
| P. ananatis DAR 76143 | GCA_000467085.1 | 5.25 | 53.4 | Draft | * | Plant pathogen | Rice | * |
| P. ananatis LMG 20103 | GCA_000025405.2 | 4.7 | 53.7 | Complete | 4076 | Plant pathogen | Eucalyptus | De Maayer et al. ( 2010) |
| P. ananatis LMG 2665T | GCA_000661975.1 | 4.94 | 53.4 | Draft | 4403 | Plant pathogen | Pineapple fruitlet | Adam et al. ( 2014) |
| P. ananatis LMG 5342 | GCA_000283875.1 | 4.91 | 53.3 | Complete | 4345 | Clinical isolate | Human wound | De Maayer et al. ( 2012a) |
| P. ananatis NS296 | GCA_001475715.1 | 4.73 | 53.5 | Draft | 4272 | Endophyte | Rice seed | Midha et al. ( 2016) |
| P. ananatis NS303 | GCA_001476115.1 | 4.73 | 53.5 | Draft | 4266 | Endophyte | Rice seed | Midha et al. ( 2016) |
| P. ananatis NS311 | GCA_001475725.1 | 4.72 | 53.5 | Draft | 4227 | Endophyte | Rice seed | Midha et al. ( 2016) |
| P. ananatis PA13 | GCA_000233595.1 | 4.87 | 53.6 | Complete | 4403 | Plant pathogen | Rice grain | Choi et al. ( 2012) |
| P. ananatis PA4 | GCA_000710015.1 | 5.16 | 53.6 | Draft | 4698 | Plant pathogen | Maize | Weller‐Stuart et al. ( 2014) |
| P. ananatis PaMB1 | GCA_000766045.1 | 4.76 | 53.8 | Draft | 4223 | Plant pathogen | * | * |
| P. ananatis R100 | GCA_001543055.1 | 4.86 | 53.6 | Complete | 4289 | Antibiosis | Rice seed | Wu et al. ( 2016) |
| P. ananatis RSA47 | GCA_001475885.1 | 4.74 | 53.5 | Draft | 4268 | Endophyte | Rice seed | Midha et al. ( 2016) |
| P. ananatis S6 | GCA_001369355.1 | 4.34 | 54.1 | Draft | 4375 | Endophyte | Maize seed | Sheibani‐Tezerji et al. ( 2015) |
| P. ananatis S7 | GCA_001369375.1 | 4.49 | 54.0 | Draft | 4516 | Endophyte | Maize seed | Sheibani‐Tezerji et al. ( 2015) |
| P. ananatis S8 | GCA_001369395.1 | 4.48 | 54.1 | Draft | 4528 | Endophyte | Maize seed | Sheibani‐Tezerji et al. ( 2015) |
| P. ananatis Sd‐1 | GCA_000582575.1 | 4.93 | 53.3 | Draft | 4332 | Biotechnological | Rice seed | Ma et al. ( 2016) |
The strain, isolation source and reason for sequencing are indicated. The sizes of the genomes, average G + C content (%), number of proteins (CDSs) encoded on the genome and sequencing status are shown, as per the National Center for Biotechnology Information Genome Assembly and Annotation report (www.ncbi.nlm.nih.gov/genome/genomes/2606).
*Data unavailable.