Table 3.
Ribosomal proteins found in the PVA‐SC6K sample.
| TAIR ID | Name | Σ PSM | Σ Coverage | PVA‐SC6K/PVA‐C6* | PVA‐SC6K/MC‐SC6K† |
|---|---|---|---|---|---|
| AT1G58684 | 40S ribosomal protein S2‐2 | 5 | 15.36 | 1.25 | |
| AT2G31610 | 40S ribosomal protein S3‐1 | 8 | 23.21 | ||
| AT4G34670 | 40S ribosomal protein S3a‐2 | 6 | 17.77 | 2.00 | |
| AT3G11940 | 40S ribosomal protein S5‐2 | 10 | 22.97 | ||
| AT4G31700 | 40S ribosomal protein S6‐1 | 3 | 12.5 | ||
| AT1G48830 | 40S ribosomal protein S7‐1 | 10 | 30.96 | ||
| AT5G59240 | 40S ribosomal protein S8‐2 | 10 | 19.13 | ||
| AT4G00100 | 40S ribosomal protein S13‐2 | 11 | 26.32 | ||
| AT3G11510 | 40S ribosomal protein S14‐2 | 12 | 38.67 | 2.40 | |
| AT2G09990 | 40S ribosomal protein S16‐1 | 4 | 17.01 | ||
| AT5G04800 | 40S ribosomal protein S17‐4 | 7 | 16.67 | ||
| AT4G09800 | 40S ribosomal protein S18 | 10 | 26.32 | ||
| AT3G09680 | 40S ribosomal protein S23‐1 | 4 | 20.18 | ||
| AT4G39200 | 40S ribosomal protein S25‐4 | 10 | 33.02 | ||
| AT2G40590 | 40S ribosomal protein S26‐1 | 4 | 25 | ||
| AT5G56670 | 40S ribosomal protein S30 | 3 | 16.13 | ||
| AT3G11250 | 60S acidic ribosomal protein P0‐3 | 8 | 30.87 | 2.67 | |
| AT5G47700 | 60S acidic ribosomal protein P1‐3 | 5 | 18.18 | ||
| AT2G27710 | 60S acidic ribosomal protein P2‐2 | 7 | 30.09 | 1.40 | |
| AT1G61580 | 60S ribosomal protein L3‐2 | 9 | 18.77 | ||
| AT3G09630 | 60S ribosomal protein L4‐1 | 17 | 20.51 | 1.70 | |
| AT1G74060 | 60S ribosomal protein L6‐2 | 12 | 28.63 | ||
| AT1G74050 | 60S ribosomal protein L6‐3 | 5 | 12.31 | ||
| AT2G01250 | 60S ribosomal protein L7‐2 | 12 | 29.17 | ||
| AT3G13580 | 60S ribosomal protein L7‐4 | 12 | 26.03 | ||
| AT2G47610 | 60S ribosomal protein L7a‐1 | 7 | 22.09 | 1.75 | |
| AT3G62870 | 60S ribosomal protein L7a‐2 | 7 | 22.09 | ||
| AT4G36130 | 60S ribosomal protein L8‐3 | 13 | 28.85 | 2.60 | |
| AT1G33140 | 60S ribosomal protein L9‐1 | 28 | 55.15 | ||
| AT4G10450 | 60S ribosomal protein L9‐2 | 34 | 61.47 | 11.33 | |
| AT1G26910 | 60S ribosomal protein L10‐2 | 9 | 17.81 | ||
| AT1G08360 | 60S ribosomal protein L10a‐1 | 11 | 20.83 | 1.22 | |
| AT5G45775 | 60S ribosomal protein L11‐2 | 4 | 8.81 | ||
| AT2G37190 | 60S ribosomal protein L12‐1 | 11 | 36.63 | 2.75 | |
| AT3G49010 | 60S ribosomal protein L13‐1 | 3 | 26.67 | 1.13 | |
| AT3G07110 | 60S ribosomal protein L13a‐1 | 3 | 15.48 | 0.75 | |
| AT2G20450 | 60S ribosomal protein L14‐1 | 4 | 15.69 | ||
| AT4G16720 | 60S ribosomal protein L15‐1 | 8 | 19.61 | 2.67 | |
| AT1G27400 | 60S ribosomal protein L17‐1 | 3 | 14.6 | ||
| AT3G05590 | 60S ribosomal protein L18‐2 | 6 | 21.61 | 1.13 | |
| AT3G16780 | 60S ribosomal protein L19‐2 | 5 | 19.07 | 1.67 | |
| AT1G09690 | 60S ribosomal protein L21‐1 | 6 | 32.32 | ||
| AT3G05560 | 60S ribosomal protein L22‐2 | 6 | 32.26 | ||
| AT3G04400 | 60S ribosomal protein L23 | 11 | 46.43 | ||
| AT3G55280 | 60S ribosomal protein L23a‐2 | 10 | 37.14 | 3.33 | |
| AT2G36620 | 60S ribosomal protein L24‐1 | 3 | 16.44 | 0.90 | |
| AT3G49910 | 60S ribosomal protein L26‐1 | 9 | 32.19 | ||
| AT4G15000 | 60S ribosomal protein L27‐3 | 4 | 19.23 | ||
| AT2G19730 | 60S ribosomal protein L28‐1 | 12 | 27.68 | ||
| AT4G18100 | 60S ribosomal protein L32‐1 | 5 | 50.62 | ||
| AT1G26880 | 60S ribosomal protein L34‐1 | 5 | 27.5 | 2.50 | |
| AT1G74270 | 60S ribosomal protein L35a‐3 | 4 | 28.57 | ||
| AT4G14320 | 60S ribosomal protein L36a | 5 | 20.88 | ||
| AT3G10950 | Putative60S ribosomal protein L37a‐1 | 5 | 27.17 | ||
| AT3G52590 | NEDD8‐like protein RUB1;60S ribosomal protein L40;40S ribosomal protein S27a‐1;40S ribosomal protein S27a‐3; Ubiquitin | 3 | 14.93 |
*Enrichment of viral proteins in PVA‐SC6K over PVA‐C6K sample.
†Enrichment of viral proteins in PVA‐SC6K over MC‐SC6K sample.