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. 2015 Jan 29;16(7):699–709. doi: 10.1111/mpp.12228

Table 4.

Influence of the silencing of LmHP1 and LmDIM5 on the expression of selected avirulence genes in axenic culture

Avirulence gene Location Fold change (P value) in:
Silenced mHP1 Silenced LmDIM5
AvrLm2 GC island −5.7* −9.6*
AvrLm1 a AT‐HB 5.6* 16.9*
AvrLm4‐7 a AT‐HB 8.8* 16.8*
AvrLmJ1 AT‐HB 4.2* 4.2
AvrLm6 AT‐HB 1.1 1.15
AvrLm11 AT‐HB 4.1* 2.9

†AT‐HB refers to AT isochores; GC islands refer to regions of more than 1 kb within AT isochores with a GC content of more than 50%.

‡Genes with fold change of less than −1.5 or more than 1.5 in transcript level and an associated P value of less than 0.05 (indicated by *) were considered to be significantly down‐ or up‐regulated in the silenced LmHP1 or silenced LmDIM5 transformants compared with the wild‐type v23.1.3 isolate in axenic culture.

a

AvrLm1 and AvrLm4‐7 data are from Soyer et al. (2014).