Table 4.
Avirulence gene | Location† | Fold change (P value) in:‡ | |
---|---|---|---|
Silenced mHP1 | Silenced LmDIM5 | ||
AvrLm2 | GC island | −5.7* | −9.6* |
AvrLm1 a | AT‐HB | 5.6* | 16.9* |
AvrLm4‐7 a | AT‐HB | 8.8* | 16.8* |
AvrLmJ1 | AT‐HB | 4.2* | 4.2 |
AvrLm6 | AT‐HB | 1.1 | 1.15 |
AvrLm11 | AT‐HB | 4.1* | 2.9 |
†AT‐HB refers to AT isochores; GC islands refer to regions of more than 1 kb within AT isochores with a GC content of more than 50%.
‡Genes with fold change of less than −1.5 or more than 1.5 in transcript level and an associated P value of less than 0.05 (indicated by *) were considered to be significantly down‐ or up‐regulated in the silenced LmHP1 or silenced LmDIM5 transformants compared with the wild‐type v23.1.3 isolate in axenic culture.
AvrLm1 and AvrLm4‐7 data are from Soyer et al. (2014).